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Record W4387415799 · doi:10.3767/persoonia.2023.51.03

Re-examination of the Southern Hemisphere truffle genus <i>Amylascus </i> (<i>Pezizaceae, Ascomycota</i> ) and characterization of the sister genus <i> Nothoamylascus</i> gen. nov.

2023· article· en· W4387415799 on OpenAlexaff
Rosanne Healy, Camille Truong, M. A. Castellano, Gregory Bonito, James M. Trappe, Marcos V. Caiafa, Alija B. Mujic, E. Nouhra, Santiago Sánchez‐Ramírez, Matthew E. Smith

Bibliographic record

VenuePersoonia - Molecular Phylogeny and Evolution of Fungi · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicLichen and fungal ecology
Canadian institutionsUniversity of Toronto
FundersOregon State UniversityUniversity of MinnesotaFlorida Museum of Natural HistoryNational Geographic SocietyNational Science Foundation
KeywordsAscomycotaBiologyGenusSisterBotanyZoologySister groupEvolutionary biologyPhylogeneticsCladeGeneticsAnthropology

Abstract

fetched live from OpenAlex

Amylascus is a genus of ectomycorrhizal truffles within Pezizaceae that is known from Australia and contains only two described species, A. herbertianus and A. tasmanicus . Species of Amylascus are closely related totruffles ( Pachyphlodes , Luteoamylascus ) and cupfungi( Plicariella ) from the NorthernHemisphere. Here we reevaluate the species diversity of Amylascus and related taxa from southern South America and Australia based on new morphological and molecular data. We identify previously undocumented diversity and morphological variability in ascospore color, ascospore ornamentation, hymenial construction, epithecium structure and the amyloid reaction of the ascusin Melzer's reagent. Were describe two Amylascus species from Australia and describe seven new Amylascus species, five from South America and two from Australia. This is the first report of Amylascus species from South America. We also describe the new South Americangenus Nothoamylascus as sister lineage to the Pachyphlodes - Amylascus-Luteoamylascus clade (including Amylascus , Luteoamylascus , Pachyphlodes , and Plicariella ). We obtained ITS sequences of mitoticsporemats from Nothoamylascus erubescens gen.&amp;sp. nov. and four of the seven newly described Amylascus species, providing the first evidence of mitoticsporematsin Amylascus . Additional ITS sequences from mitoticsporemats reveal the presence of nine additional undescribed Amylascus and one Nothoamylascus species that do not correspond to any sampled as comata. We also identify three additional undescribed Amylascus secies base do nenvironmental sequences from the feces of two ground dwelling bird species from Chile, Scelorchilus rubecula and Pteroptochos tarnii . Our results indicate that as comata from Amylascus and Nothoamylascus speciesare rarely collected, but molecular data from ectomy corrhizal roots and mitoticsporemats indicate that these species are probably common and wide spread in southern South America. Finally, we present a time-calibrated phylogeny that is consistent with a late Gondwanan distribution. The time since the most recent common ancestor of: 1) the family Pezizaceae had a mean of 276 Ma (217–337HPD);2) the Amylascus-Pachyphlodes-Nothoamylascus-Luteoamylascus clade had a mean of 79Ma(60–100HPD); and 3) the Amylascus - Pachyphlodes cladehadameanof50Ma(38–62HPD). Thecrownageof Pachyphlodes had a mean of 39Ma(25–42HPD) and Amylascus had a mean age of 28 Ma(20–37HPD), falling near the Eocene Oligocene boundary and the onset of the Antarcticglaciation (c.35Ma).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.829
Threshold uncertainty score0.282

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.177
Teacher spread0.170 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

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