MétaCan
Menu
Back to cohort
Record W4387534687 · doi:10.1016/j.jobab.2023.09.004

Efficient lignin biodegradation triggered by alkali-tolerant ligninolytic bacteria through improving lignin solubility in alkaline solution

2023· article· en· W4387534687 on OpenAlexvenueno aff
Zhaoxian Xu, Jie Li, Pingping Li, Chenggu Cai, Sitong Chen, Boning Ding, Shuangmei Liu, Mianshen Ge, Mingjie Jin

Bibliographic record

VenueJournal of Bioresources and Bioproducts · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicEnzyme-mediated dye degradation
Canadian institutionsnot available
FundersNational Key Research and Development Program of ChinaNational Natural Science Foundation of China
KeywordsLigninBiodegradationSolubilityDissolutionChemistryAqueous solutionAlkali metalOrganic chemistryBacteriaBiology

Abstract

fetched live from OpenAlex

Low lignin solubility in aqueous solution is one of the major bottlenecks for lignin biodegradation and bioconversion. Alkaline solution contributes to improving lignin solubility, whereas most microbes can not survive in alkaline conditions. Herein, lignin dissolution behaviors in different pH solutions were systematically investigated, which indicated that solution pH above 10.5 contributed to high solubility of alkali lignin. To match with alkaline lignin aqueous system, several alkali-tolerant ligninolytic bacteria were isolated, most of which are distinct to previously reported ones. Then, the ligninolytic capabilities of these isolates were assessed in different pH conditions by determining their assimilation on alkali lignin, lignin-derived monomers and dimers, their decolorization capabilities, and their lignin peroxidase activities. Thereafter, the underlying ligninolytic and alkali-tolerant mechanisms of Sutcliffiella sp. NC1, an alkalophilic bacterium, was analyzed on the basis of its genome information. The results not only provide valuable information for lignin biodegradation and lignin valorization, but also expand knowledge on alkali-tolerant bacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.104
Threshold uncertainty score0.424

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.216
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueJournal of Bioresources and BioproductsSame topicEnzyme-mediated dye degradationFrench-language works237,207