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Record W4387621084 · doi:10.1161/res.133.suppl_1.p2101

Abstract P2101: Elucidating Heterogeneity Between Left And Right Ventricle-derived Cardiac Fibroblasts

2023· article· en· W4387621084 on OpenAlexaff
Michael Dewar, Haisam Shah, Dylan Langburt, Fahad Ehsan, Alison Hacker, Scott P. Heximer

Bibliographic record

VenueCirculation Research · 2023
Typearticle
Languageen
FieldMedicine
TopicTissue Engineering and Regenerative Medicine
Canadian institutionsQueen's UniversityMcGill UniversityUniversity of TorontoSt. Michael's Hospital
Fundersnot available
KeywordsCTGFVentricleIGFBP3FibrosisTranscriptomeInternal medicinePopulationCardiac fibrosisMedicineCardiologyBiologyGene expressionGrowth factorGeneGenetics

Abstract

fetched live from OpenAlex

Cardiac fibrosis is a major risk factor for cardiovascular disease, leading to impaired electrical conduction and reduced ventricular compliance in the heart. Different pathophysiologic conditions can lead to fibrosis in the left ventricle (LV) and/or right ventricle (RV). Despite building evidence to support the transcriptomic heterogeneity of cardiac fibroblasts (CFs) in healthy and diseased states, there have been no direct comparisons of CFs in the LV and RV. Due to the developmental and physiologic differences between the two ventricles, we hypothesized that LV and RV-derived CFs would display transcriptomic differences that influence their proliferation and differentiation following injury. Bulk RNA-seq data from the LVs and RVs of uninjured male mice revealed 442 differentially expressed genes (p<0.05, n=4) with numerous fibrosis-related genes such as Igfbp3 , Col8a1 , Ctgf , Aspn , and Postn being the most significantly different. Single-cell RNA-seq analysis of CFs from uninjured tissue identified nine subpopulations, two of which displayed LV vs RV differences. CFs marked by high expression of Postn , Col8a1 , and Ctgf were more abundant in the LV, whereas CFs marked by high expression of Igfbp3 , Fgl2 , and Sfrp2 were more abundant in the RV. Comparisons with published datasets suggest that Postn -high CFs are primed for differentiation into injury-induced CFs. While the Igfbp3 -high population has not previously been described, top marker genes have mixed pro- and anti-fibrotic roles. We then used surgical models of pressure overload injury (TAC and PAB) to study changes in the transcriptome of LV and RV-derived CFs respectively at 14 days post-surgery. Single cell RNA-seq analysis showed that the LV developed a larger population of pro-fibrotic Thbs4 +/ Cthrc1 + injury-induced CFs while the RV uniquely showed expansion of Igfbp3 - and Inmt -high CFs. Injury experiments were repeated with female mice and showed the same results. These findings demonstrate that LV and RV-derived CFs display subpopulation differences that may cause their diverging responses to pressure overload injury. Further study of these subpopulations will elucidate their role in the development of fibrosis and inform whether LV and RV fibrosis require distinct treatments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.098
GPT teacher head0.393
Teacher spread0.295 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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