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S222 Endoscopic Scoring Indices for Assessing Disease Severity in Familial Adenomatous

2023· article· en· W4387734220 on OpenAlexaff
Anna L. Silverman, Hicham Bouchiba, Arthur S. Aelvoet, John K MacDonald, Brian G. Feagan, Vipul Jairath, Christopher Ma, Evelien Dekker, N. Jewel Samadder

Bibliographic record

VenueThe American Journal of Gastroenterology · 2023
Typearticle
Languageen
FieldMedicine
TopicGenetic factors in colorectal cancer
Canadian institutionsUniversity of CalgaryWestern University
Fundersnot available
KeywordsMedicineFamilial adenomatous polyposisInternal medicineDiseaseSeverity of illnessColorectal cancerCancer

Abstract

fetched live from OpenAlex

Introduction: Several therapeutics are in development for familial adenomatous polyposis (FAP) to reduce polyp burden, the incidence of cancer and prevent or postpone surgery. However, there is limited consensus on the optimal method for measuring disease severity in FAP. We aimed to systematically review existing endoscopic severity indices for FAP. Methods: We searched MEDLINE, EMBASE and the Cochrane Library from inception to May 22, 2023 to identify studies that evaluated endoscopic disease severity and severity in children and adults with FAP. Results: A total of 94 studies were included. We evaluated component items of scoring indices, such as polyp count, polyp size and histology, and the scoring indices themselves (Table 1). Partial validation was observed for polyp count and size. The most common reported scoring index was the Spigelman classification system, which was used for assessing the severity of duodenal involvement. A single study reported almost perfect inter- and intra-observer agreement for this system. The InSIGHT polyposis staging system, which was used for assessing colorectal polyp burden has been partially validated. It showed substantial inter-observer reliability, however it lacked intra-observer reliability. Novel criteria for high-risk gastric polyps was developed and assessed for inter-observer reliability; however it showed a poor level of agreement. Another scoring index assessing the anal transition zone has not undergone validation. Conclusion: There are no fully validated endoscopic disease severity indices for FAP. Development and validation of reliable and responsive endoscopic disease severity instrument will be informative for clinical care, research and to assess the impact of pharmacological therapies on polyp burden in FAP. Table 1. - Characteristics of Included Studies Total studies (n = 94) Scoring items 57 (60.6%) Polyp count 52 (55.3%) Gastric 10 (10.6%) Duodenal and jejunal 11 (11.7%) Colorectal 33 (35.1%) Pouch 6 (6.4%) Polyp size 20 (21.3%) Gastric 5 (5.3%) Duodenal and jejunal 8 (8.5%) Colorectal 4 (4.3%) Pouch 4 (4.3%) Polyp histology 9 (9.6%) Gastric 2 (2.1%) Duodenal and jejunal 4 (4.3%) Colorectal 0 Pouch 3 (3.2%) Scoring indices 37 (39.4%) Spigelman classification 33 (35.1%) InSiGHT Polyposis Staging System (IPSS) 2 (2.1%) Grade severity of anal transition zone 1 (1.1%) Criteria to identify high risk gastric polyps 1 (1.1%)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.024
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.015
Threshold uncertainty score0.035

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.024
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0030.003
Bibliometrics0.0150.011
Science and technology studies0.0000.001
Scholarly communication0.0010.002
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0060.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.319
Teacher spread0.297 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2023
Admission routes1
Has abstractyes

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