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S1510 Multi-Drug Resistant Organisms (MDRO) Account for Majority of Resistant Microbiology Cultures in Admitted Patients With Cirrhosis in Newfoundland and Labrador

2023· article· en· W4387750048 on OpenAlexaffabout
Scott D. Bray, Mark Borgaonkar

Bibliographic record

VenueThe American Journal of Gastroenterology · 2023
Typearticle
Languageen
FieldMedicine
TopicLiver Disease and Transplantation
Canadian institutionsMemorial University of Newfoundland
Fundersnot available
KeywordsMedicineCirrhosisInternal medicineAntimicrobialPopulationDrug resistanceAntibioticsAntibiotic resistanceEnterococcus faeciumBlood cultureTigecyclineMicrobiologyIntensive care medicine

Abstract

fetched live from OpenAlex

Introduction: Patients with decompensated cirrhosis have increased hospitalizations causing a higher risk of acquiring infections caused by multi-drug resistant organisms (MDRO). MDRO lead to delayed appropriate treatment causing increased morbidity, and mortality in the cirrhotic population. We aimed to determine the prevalence of MDRO and extrapolate the implication this may have on empiric antimicrobial treatment in cirrhotic patients hospitalized in Newfoundland and Labrador (NL). Methods: Patients with a history of cirrhosis and antimicrobial resistant cultures admitted to an acute care facility in the Eastern Health Region of NL between 2016-2021 were included in this study (n=142). Cirrhosis was defined as evidence of advanced liver fibrosis seen on ultrasound, CT-scan or MRI. Each patient was then grouped into non-MDRO or MDRO based on their microbiology culture report. Non-MDRO group was defined as patients with positive microbiology cultures showing resistance to 1 or 2 antimicrobials. Whereas the MDRO group was defined as patients with positive microbiology cultures showing resistance to 3 or more antimicrobials. Microbiology cultures included in this study were, ascitic fluid, blood, pleural fluid, sputum, urine, and wound cultures. Microbiology culture collection date was then cross-referenced with date of admission to determine if their infection was diagnosed upon presentation to hospital or a hospital-acquired infection (HAI). Results: On review of 142 cirrhotic patients with resistant microbiology cultures, MDRO accounted for 54.7% of all resistant organisms in the cirrhotic patient population through 2016-2021 with the most common MDRO being Escherichia Coli (32.1%) and Enterococcus Faecium (23.5%). Urine cultures were found to be the most common source of MDRO (32.4%), followed by blood cultures (10.8%) and ascitic fluid cultures (4.1%). HAI associated MDRO accounted for 31.0% of all resistant organisms throughout this study time period. Conclusion: These data indicate that in hospitalized cirrhotic patients with drug resistant infections, over 50% have MDRO. These findings could have implications for initial antibiotic choice in this patient population.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.904
Threshold uncertainty score0.190

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.245
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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