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Record W4387767002 · doi:10.1101/2023.10.16.562486

Efficient Drug Delivering of a Photodynamic Therapy Agent into Cellular Membranes Rationalized by Molecular Dynamics

2023· preprint· en· W4387767002 on OpenAlexaff
Basak Koca Fındık, Ilya Yakavets, Henri‐Pierre Lassalle, Şaron Çatak, Antonio Monari

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid Membrane Structure and Behavior
Canadian institutionsUniversity of Toronto
FundersTürkiye Bilimsel ve Teknolojik Araştırma KurumuUlusal Yüksek Başarımlı Hesaplama Merkezi, Istanbul Teknik ÜniversitesiGrand Équipement National De Calcul IntensifAgence Nationale de la RechercheLaboratoire d'Excellence SEAM
KeywordsPhotodynamic therapyInternalizationDrugLipid bilayerDrug deliveryMembraneChemistryBilayerCyclodextrinBioavailabilityBiophysicsDissociation (chemistry)PharmacologyNanotechnologyMedicineMaterials scienceBiochemistryOrganic chemistryBiology

Abstract

fetched live from OpenAlex

Photodynamic Therapy (PDT) represents a most attractive therapeutic strategy to reduce side effects of chemotherapy and improve the global quality of life of patients. Yet, many PDT drugs suffer from a poor bioavailability and cellular intake, and thus, drug delivery strategy should be implemented. In this letter we report the behavior of a temoporfin-based PDT drug, commercialized under the name of Foscan, complexed by two beta-cyclodextrin units in presence of a lipid bilayer. Our all atom simulations have shown the internalization of the complex and its spontaneous dissociation inside the lipid bilayer. The factors favoring penetration and dissociation have also been analyzed, together with the membrane perturbation due to the interaction with the cyclodextrin complex. Our results confirm the suitability of the encapsulation strategy for PDT, and rationalize the experimental results concerning its efficacy.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.218
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicLipid Membrane Structure and Behavior→French-language works237,207→