MétaCan
Menu
Back to cohort
Record W4388006999 · doi:10.1136/bmjebm-2023-112475

How to use the regulatory data from Health Canada for secondary analyses on new drugs, biologics and vaccines

2023· article· en· W4388006999 on OpenAlexafffundabout
Isaac Bai, Peter Doshi, Matthew Herder

Bibliographic record

VenueBMJ evidence-based medicine · 2023
Typearticle
Languageen
FieldMedicine
TopicClinical practice guidelines implementation
Canadian institutionsDalhousie University
FundersDalhousie University
KeywordsMedicinePublic healthInternet privacyBusinessComputer science

Abstract

fetched live from OpenAlex

Incorporating clinical data held by national health product regulatory authorities into secondary analyses such as systematic reviews can help combat publication bias and selective outcome reporting, in turn, supporting more evidence-based decisions regarding the prescribing of drugs, biologics and vaccines. Owing to recent changes in Canadian law, Health Canada has begun to make clinical information-whether it has been previously published or not-publicly available through its 'Public Release of Clinical Information' (PRCI) online database. We provide guidance about how to access and use regulatory data obtained through the PRCI database for the purpose of conducting drug and biologic secondary analyses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmaMetaresearchOpen science
Domain: Reproducibility · Genre: Methods
About the Canadian research system: yes · About a Canadian topic: yes
Not applicablehigh
gptMetaresearchOpen science
Domain: Methods · Genre: Methods
About the Canadian research system: no · About a Canadian topic: yes
Other designhigh
models splitAgreement compares identical category sets and study designs across arms.

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.310
metaresearch head score (Gemma)0.736
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.981
Threshold uncertainty score0.965

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3100.736
Meta-epidemiology (narrow)0.0020.005
Meta-epidemiology (broad)0.0070.008
Bibliometrics0.0290.029
Science and technology studies0.0040.005
Scholarly communication0.0200.012
Open science0.0070.008
Research integrity0.0100.008
Insufficient payload (model declined to judge)0.0650.048

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.747
GPT teacher head0.583
Teacher spread0.164 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Labeled directly by 2 models reading the full record.

MetaresearchOpen science

The models disagree on parts of this classification; every voice is preserved in the section at the end of the page.

Study designNot applicable · Other design
DomainReproducibility · Methods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes3
Has abstractyes

Explore more

Same venueBMJ evidence-based medicineSame topicClinical practice guidelines implementationCategoryMetaresearchFrench-language works237,207