MétaCan
Menu
← Back to cohort
Record W4388163475 · doi:10.1101/2023.10.24.563420

Forest tree extracts induce resistance to <i>Pseudomonas syringae</i> pv. <i>tomato</i> in Arabidopsis

2023· preprint· en· W4388163475 on OpenAlexafffund
Veedaa Soltaniband, Adam Barrada, Maxime Delisle‐Houde, Martine Dorais, Russell J. Tweddell, Dominique Michaud

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicPlant-Microbe Interactions and Immunity
Canadian institutionsUniversité LavalMinistère de l'Agriculture, des Pêcheries et de l'Alimentation
FundersUniversiteit UtrechtMinistère de l'Agriculture, des Pêcheries et de l'AlimentationUniversité Laval
KeywordsPseudomonas syringaeSalicylic acidArabidopsisBiologyArabidopsis thalianaPlant defense against herbivoryPathogenic bacteriaGenePseudomonasHost (biology)BacteriaMicrobiologyBotanyGenetics

Abstract

fetched live from OpenAlex

Abstract Background The widespread use of conventional pesticides to control plant fungal and bacterial pathogens poses significant risks to human health and the environment, and there is an urgent need for safer and more sustainable alternatives in agricultural management. Studies have shown that plant extracts can be effective in controlling plant diseases either by directly targeting the pathogens or by reinforcing the host plant’s own defenses. Here, we examined the potential of ethanolic extracts from forest tree species eastern hemlock, English oak, eastern red cedar and red pine for their antibacterial activity against Pseudomonas syringae pv. tomato ( Pst ) strain DC3000 and the ability of these forestry by-products to trigger effective defense responses in the model plant Arabidopsis thaliana . Results The four tree extracts exhibited direct toxic effects against Pst DC3000, as notably observed for the English oak extract inhibiting bacterial growth and showing bactericidal activity at relatively low concentrations. Using an Arabidopsis line expressing reporter protein ß-glucuronidase under the control of a salicylic acid-inducible pathogenesis-related protein gene promoter, the extracts were shown also to induce defense-related genes expression in leaf tissue. RT-qPCR assays with DNA primers for different gene markers further confirmed this conclusion and highlighted gene-inducing effects for the tree extracts triggering, at different rates, the expression of salicylic acid- and oxidative stress-responsive genes. The extracts direct antibacterial effects, combined with their defense gene-inducing effects in planta , resulted in a strong host plant-protecting effect against Pst DC3000 associated with bacterial growth rates reduced by ∼75 to 98% seven days post-infection, depending on the extract. Conclusions These findings show the effectiveness of tree extracts as eventual plant protectants against the plant bacterial pathogen Pst . In a broader perspective, they suggest the potential of these forestry by-products as a source of bioactive compounds useful in plant protection and as a sustainable, eco-friendly alternative to conventional synthetic pesticides for the management of economically important plant pathogens.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.222
Teacher spread0.196 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicPlant-Microbe Interactions and Immunity→French-language works237,207→