MétaCan
Menu
← Back to cohort
Record W4388202215 · doi:10.32942/x2zc84

Uneven genetic data limits biodiversity assessments in protected areas globally

2023· preprint· en· W4388202215 on OpenAlexaff
Ivan Paz‐Vinas, Amy G. Vandergast, Chloé Schmidt, Deborah M. Leigh, Simon Blanchet, René D. Clark, Eric D. Crandall, Hanne De Kort, Colin J. Garroway, Eleana Karachaliou, Francine Kershaw, David O’Brien, Malin L. Pinsky, Gernot Segelbacher, Maggie Hunter

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsUniversity of Manitoba
FundersU.S. Geological Survey
KeywordsBiodiversityGenetic diversityRepurposingEnvironmental resource managementGeographyPopulationGenetic dataConservation geneticsEnvironmental planningEcologyBiologyEnvironmental science

Abstract

fetched live from OpenAlex

Increasing the extent of protected areas (PA) through 30x30 and other area-based conservation initiatives can help to achieve global biodiversity conservation goals across all biodiversity levels. However, intraspecific genetic variation, the foundational level of biodiversity, is rarely explicitly considered in PA design or quality performance assessments. Repurposing existing genetic data could rapidly inform area-based conservation planning and improve the preservation of genetic variation. Through a global compilation of population-level nuclear genetic data (>2 million individuals; 36,356 populations; 2,809 species), we identified both data-rich areas, and substantial geographic and taxonomic gaps. These gaps are within many protected areas and hotspots of species biodiversity, and may preclude robust protection of genetic diversity. Addressing data unevenness through efforts to collect, gather, harmonize and share genetic data globally could help support integration of genetic information into PA design, PA performance assessments, and genetically-oriented global conservation policies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.019
metaresearch head score (Gemma)0.063
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.019
Threshold uncertainty score0.101

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0190.063
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0050.008
Science and technology studies0.0010.003
Scholarly communication0.0050.005
Open science0.0010.006
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.319
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2023
Admission routes1
Has abstractyes

Explore more

Same topicGenetic diversity and population structure→French-language works237,207→