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Record W4388286779 · doi:10.1093/cid/ciad666

Early Oral Antibiotic Switch in <i>Staphylococcus aureus</i> Bacteraemia: The <i>Staphylococcus aureus</i> Network Adaptive Platform (SNAP) Trial Early Oral Switch Protocol

2023· article· en· W4388286779 on OpenAlexafffund
Dana de Kretser, Jocelyn Mora, Max Bloomfield, Anita J Campbell, Matthew P. Cheng, Stephen Guy, M.P.M. Hensgens, Shirin Kalimuddin, Todd C. Lee, Amy Legg, Robert K. Mahar, Michael Marks, Julie Marsh, Anna McGlothin, Susan C. Morpeth, Archana Sud, Jaap ten Oever, Dafna Yahav, Marc Bonten, Asha C Bowen, Nick Daneman, Sebastiaan J. van Hal, G Hériot, Roger Lewis, David Chien Lye, Zoe McQuilten, James O. Robinson, Jason A. Roberts, Matthew Scarborough, Steve Webb, Lynda Whiteway, Steven Y. C. Tong, Joshua S. Davis, Anna L. Goodman, Genevieve Walls, Anna McGlothlin, Nick Anagnostou, Sophia Acrhuleta, Eugene Athan, Lauren Barina, Emma Best, Katie Brett, Hannah J. Burden, Peter Daley, Jane Davies, Productora De, Yael Dishon‐Benattar, Katie L. Flanagan, Jennifer Grant, Dan Gregson, Kate Grimwade, James Hatcher, Andrew Henderson, Dina Janković, Jennie Johnstone, I Russel Lee, Ka Lip Chew, Martin Llewelyn, Anne‐Grete Märtson, Colin McArthur, Diana McNeil, Sarah Metcalf, Clare Nourse, Matthew O’Sullivan, Lina Petrella, Sarah Pett, Benjamin A. Rogers, James Heng Chiak Sim, Marta Soares, Neil Stone, Robert Tilley, Rebecca Turner, Viliame Tutone, Jonathan Underwood, Lesley Voss, Rachel Webb, Heather L. Wilson, Terence Wuerz

Bibliographic record

VenueClinical Infectious Diseases · 2023
Typearticle
Languageen
FieldImmunology and Microbiology
TopicAntibiotic Use and Resistance
Canadian institutionsHealth Sciences CentreUniversity of TorontoMcGill University Health CentreSunnybrook Health Science CentreInstitute of Infection and ImmunityMcGill University
FundersHealth Research Council of New ZealandInstitute of Infection and ImmunityNational Health and Medical Research CouncilCanadian Institutes of Health ResearchNational Institute for Health and Care ResearchStarship FoundationRadboud Universitair Medisch CentrumRadboud UniversiteitLee Kong Chian School of Medicine, Nanyang Technological UniversityFaculty of Medicine, University of British ColumbiaCardiff UniversityCharles Darwin UniversityDeakin UniversityHunter Medical Research InstituteMonash UniversityMenzies School of Health ResearchMedical Research CouncilNational Medical Research CouncilUniversity of TorontoUniversity College LondonCanterbury District Health BoardMcGill UniversityUniversity Hospitals Plymouth NHS TrustMcGill University Health CentreUniversity College London Hospitals NHS Foundation TrustUniversity of Haifa
KeywordsStaphylococcus aureusMedicineAntibioticsMicrobiologyStaphylococcal infectionsBacteriaBiologyGenetics

Abstract

fetched live from OpenAlex

BACKGROUND: Staphylococcus aureus bloodstream infection (bacteremia) is traditionally treated with at least 2 weeks of intravenous (IV) antibiotics in adults, 3-7 days in children, and often longer for those with complicated disease. The current practice of treating S. aureus bacteremia (SAB) with prolonged IV antibiotics (rather than oral antibiotics) is based on historical observational research and expert opinion. Prolonged IV antibiotic therapy has significant disadvantages for patients and healthcare systems, and there is growing interest in whether a switch to oral antibiotics following an initial period of IV therapy is a safe alternative for clinically stable patients. PROTOCOL: The early oral switch (EOS) domain of the S. aureus Network Adaptive Platform (SNAP) trial will assess early switch to oral antibiotics compared with continued IV treatment in clinically stable patients with SAB. The primary endpoint is 90-day all-cause mortality. Hospitalised SAB patients are assessed at platform day 7 ±2 (uncomplicated SAB) and day 14 ±2 (complicated SAB) to determine their eligibility for randomization to EOS (intervention) or continued IV treatment (current standard of care). DISCUSSION: Recruitment is occurring in the EOS domain of the SNAP trial. As of August 2023, 21% of all SNAP participants had been randomized to the EOS domain, a total of 264 participants across 77 centers, with an aim to recruit at least 1000 participants. We describe challenges and facilitators to enrolment in this domain to aid those planning similar trials.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.015
Threshold uncertainty score0.050

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.005
Meta-epidemiology (narrow)0.0020.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0030.003
Insufficient payload (model declined to judge)0.0150.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.324
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations22
Published2023
Admission routes2
Has abstractyes

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