MétaCan
Menu
Back to cohort
Record W4388451702 · doi:10.1093/jnci/djad228

RE: Use of artificial intelligence for cancer clinical trial enrollment

2023· letter· en· W4388451702 on OpenAlexaff
Jiawen Deng, Kiyan Heybati

Bibliographic record

VenueJNCI Journal of the National Cancer Institute · 2023
Typeletter
Languageen
FieldMedicine
TopicEthics in Clinical Research
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsCancerMedicineClinical trialOncologyArtificial intelligenceInternal medicineComputer science

Abstract

fetched live from OpenAlex

Clinical trials represent a pivotal step in advancing novel cancer therapies from development to clinical application. Despite a strong willingness among patients to participate, however, less than 5% of adult patients with cancer are enrolled in oncology trials. Enhancing enrollment workflows can expedite treatment advances and lead to faster patient outcome improvements (1). In their review in this issue of the Journal, Chow et al. (2) found that artificial intelligence (AI) workflows for trial enrollment outperformed manual methods, with industry-developed systems having higher positive predictive values than in-house systems. Although we commend Chow et al. for their comprehensive review, we believe that certain concerns warrant further discussion. First, the AI workflows examined had substantial heterogeneities, which complicates the meta-analysis and interpretation of AI performance. AI enrollment workflows can generally be broken down into 3 steps: 1) extracting eligibility criteria from protocols, 2) extracting data from electronic health records, and 3) matching the extracted data with the eligibility criteria (3). The studies included in the review differed greatly in how they approached these steps. For instance, where Meystre et al. (3) applied AI only to the latter 2 steps, Beck et al. (4) automated all 3. Thus, the accuracy of Meystre et al.’s workflow would be less affected by AI than that of Beck et al. Meanwhile, other studies, such as Calaprice-Whitty et al. (5), incorporated auxiliary systems such as optical character recognition, which introduced additional failure points that could reduce the study’s accuracy. The workflow assessed may differ even when the same AI platform was assessed in different studies. For example, both Alexander et al. (6) and Beck et al. (4) evaluated IBM’s Watson for Clinical Trial Matching (WCTM) system (IBM Corp, Armonk, NY). Yet, where Alexander et al. manually entered input parameters into WCTM, Beck et al. used WCTM’s natural language processing system to extract the input parameters from unstructured electronic health records. Hence, Alexander et al.’s study accuracy would be less affected by the performance of the WCTM natural language processing system than the study by Beck et al. Given such variations, summary statistics from meta-analyses become less insightful. What do the pooled metrics actually mean? Which enrollment step has the greatest implications for AI performance? Which AI algorithm is the best for each step? How do auxiliary systems such as optical character recognition affect the overall AI system’s performance? These are important questions that were overlooked in Chow et al.’s (2) review and require closer assessment in future reviews. Second, although the authors found that industry-developed systems exhibited higher positive predictive values than did in-house systems, they did not discuss the potential impact of conflict of interest on these findings. Industry sponsorship has been a historical sticking point in oncology research, with industry-funded studies more likely to yield positive outcomes and publish in high-impact journals (7). In Chow et al.’s review, studies assessing industry-developed systems all received industry funding, often from the very developers of the platforms under review (see Table 1). Many authors of these studies were also employed by the developers or hold stock options in the developers. Given that these preliminary studies are not registered as clinical trials, they are prone to biases. Hence, caution should be exercised when interpreting these results. Funding sources and conflict of interest of studies assessing the industry-developed systems included in the Chow et al. review Funding sources and conflict of interest of studies assessing the industry-developed systems included in the Chow et al. review In conclusion, although we share the authors’ belief in AI’s potential role in clinical trial enrollment, further investigations from nonindustry sources—with particular focus on each specific step of the AI enrollment process—would be needed to advance the field of AI applications in oncology trials. No data are reported in this correspondence. Jiawen Deng, MS-2 (Conceptualization; Investigation; Writing—original draft; Writing—review & editing), Kiyan Heybati, MS-3, MSc(c) (Investigation; Writing—review & editing). This correspondence and its authors received no funding support from any funding agency in the public, commercial, or not-for-profit sectors. The authors declare no conflicts of interest.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmano category
Domain: not available · Genre: Commentary
About the Canadian research system: no · About a Canadian topic: no
Not applicablelow
gptno category
Domain: not available · Genre: Commentary
About the Canadian research system: no · About a Canadian topic: no
Not applicablehigh
models agreeAgreement compares identical category sets and study designs across arms.

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.132
metaresearch head score (Gemma)0.376
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Commentary · Consensus signal: none
Teacher disagreement score0.132
Threshold uncertainty score0.697

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.1320.376
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0030.006
Bibliometrics0.0100.008
Science and technology studies0.0010.002
Scholarly communication0.0060.006
Open science0.0050.004
Research integrity0.0020.004
Insufficient payload (model declined to judge)0.0120.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.906
GPT teacher head0.688
Teacher spread0.218 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Labeled directly by 2 models reading the full record.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueJNCI Journal of the National Cancer InstituteSame topicEthics in Clinical ResearchFrench-language works237,207