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DELFI: A computer oracle for recommending density functionals for excited states calculations

2023· preprint· en· W4388704142 on OpenAlexafffund
Davide Avagliano, Marta Skreta, Sebastian Arellano-Rubach, Alán Aspuru‐Guzik

Bibliographic record

VenueChemRxiv · 2023
Typepreprint
Languageen
FieldMaterials Science
TopicMachine Learning in Materials Science
Canadian institutionsUniversity of Toronto
FundersCanada First Research Excellence FundNatural Resources CanadaUniversity of TorontoAlliance de recherche numérique du CanadaGovernment of Ontario
KeywordsExcited stateDensity functional theoryOracleComputer scienceManifold (fluid mechanics)Point (geometry)AlgorithmStatistical physicsPhysicsQuantum mechanicsMathematics

Abstract

fetched live from OpenAlex

Density functional theory (DFT) is known as the workhorse of computational quantum chemistry. One of its main limitations, if not the main one, is that choosing the right functional to employ is a non-trivial task left for human experts. The choice is particularly hard for excited states calculations, when using the time-dependent formulation of DFT (TD-DFT). This is not only due to the approximations and limitations of the method, but also because the photophysical properties of a molecule are defined by a manifold of states that all need to be properly described in a balanced manner to obtain an accurate photochemical picture. This includes not only the relative energy of the states, but also capturing the correct character, order and intensity of the transitions. In this work, we developed a scoring system to quantitatively define the accuracy of an excited states calculation by simultaneously considering at the same time all these properties of a manifold of states. The scoring system is generalizable to any level of theory, we here applied it to a large dataset of organic molecules, calculating 38 scores for as many common functionals of different type and rung, against a higher accuracy method for a total of more than 820.000 single point calculations. The results of these calculations are collected in a database that we released and made it open, providing 4 million datapoints to be used by the community for future applications. We used the scores we extrapolated to train a graph attention neural network that is used to predict the 38 scores for molecules represented as 2D graphs. We call this oracle DELFI (Data-driven EvaLuation of Functionals by Inference), which can be used to quickly screen and predict the ranking of functionals to calculate optical properties of organic molecules. A corresponding web application allows to easily run DELFI and analyze the results, alleviating the hurdle of choosing the right functional for TD-DFT calculations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.440
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0020.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.081
GPT teacher head0.341
Teacher spread0.260 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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