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<i>In vivo</i> imaging of infection‐induced cogulopathy in the microcirculation

2016· article· en· W4389007466 on OpenAlexafffundabout
Craig N. Jenne, Rachelle P. Davis, Braedon McDonald

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldImmunology and Microbiology
TopicNeutrophil, Myeloperoxidase and Oxidative Mechanisms
Canadian institutionsUniversity of British ColumbiaUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsNeutrophil extracellular trapsFibrinIntravital microscopyPlateletDisseminated intravascular coagulationCoagulationMicrocirculationIn vivoPathologyPlatelet activationImmune systemCell biologyInflammationBiologyImmunologyChemistryMedicineInternal medicine

Abstract

fetched live from OpenAlex

Patients with systemic infection often develop disseminated intravascular coagulation (DIC), a condition leading to clot formation throughout the vasculature. This systemic coagulation can impair blood flow within the tissue microvasculature and has been associated with organ damage and dysfunction. Infection also triggers the release of Neutrophil Extracellular Traps (NETs) within the vasculature. NETs are comprised of extracellular DNA covered in a number of nuclear and antimicrobial proteins. This immune response is designed to catch and kill pathogens, but also has the potential to bind platelets and initiate coagulation. Currently, most studies are limited to the histological analysis of tissue sections or in vitro biochemical assays, providing only snapshots of these complex and dynamic processes. As such the specific interaction between NETs, platelets and coagulation are poorly understood. Using intravital microscopy (IVM), can directly visualize NET formation and fibrin deposition in real‐time, in the blood vessels of live mice following infection. Additionally, we have developed a novel imaging protocol using an enzyme‐activatable fluorescent probe to track the time and location of thrombin activation within the vasculature of live mice. Importantly, IVM allows us to understand not only the complex interactions between the pathogen, immunity and coagulation, but to also the effect of these interactions on vascular perfusion and tissue damage. Following i.v. challenge with bacteria, we measure significant NET deposition within the liver sinusoids. These NETs in turn activate thrombin leading to fibrin deposition, vascular occlusion and tissue damage. Importantly, treatments that prevent NET formation, break‐down NETs within the vasculature, or block key NET components significantly inhibit thrombin activation, improve perfusion and attenuate tissue damage. Support or Funding Information This work is supported by grants from the Critical Care Strategic Clinical Network and the Natural Sciences and Engineering Research Council of Canada (NSERC)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.024

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.240
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes3
Has abstractyes

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