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YKL40: a key modulator of the CF inflammatory response?

2017· article· en· W4389021546 on OpenAlexfundaboutno aff
Guillaume F. Bouvet, Olivia Bulka, Adèle Coriati, Chantal Massé, Yves Berthiaume

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicStudies on Chitinases and Chitosanases
Canadian institutionsnot available
FundersCystic Fibrosis Canada
KeywordsProinflammatory cytokinePeripheral blood mononuclear cellContext (archaeology)MedicineBiomarkerCystic fibrosisImmunologyPulmonary function testingInternal medicineGlycemicInflammationBiologyInsulinIn vitro

Abstract

fetched live from OpenAlex

YKL‐40 is a human circulating chitinase‐like protein and inflammatory biomarker whose levels are elevated in the blood serum of cystic fibrosis (CF) patients and CF patients with dysglycemia. We explored the effects of treatment with YKL‐40 on peripheral blood mononuclear cells (PBMC) isolated from the whole blood of 70 CF patients, in the context of the inflammatory gene response. The relative expressions of genes for both proinflammatory and immunosuppressive molecules in response to YKL‐40 treatment were quantified and analyzed in conjugation with biological characteristics obtained from each patient, including forced expiratory volume (FEV 1 %), a functional measure of pulmonary ability or disease progression, as well as sex and glycemic status. We found significant positive correlations between the expression of IL‐10 and TGF‐b in response to YKL‐40. Additionally, the FEV 1 % was found to be negatively correlated with IL‐10 expression. After analysis against sex and glycemic status, we found that a significant proportion of the FEV 1 % low /IL‐10 high group consisted of dysglycemic women. These correlations suggest that as the degree of pulmonary function decreases across patients, CF‐PBMC express IL‐10/TGF‐b gene response to YKL‐40, and that dysglycemic women with CF are more predisposed to developing this phenotype in response to elevated YKL‐40 in the peripheral blood. In addition to being a proinflammatory protein and a biological marker of disease evolution, YKL‐40 looks to act as a complex inflammatory modulator in CF. Support or Funding Information Cystic Fibrosis Canada

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.296
Threshold uncertainty score0.703

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.249
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes2
Has abstractyes

Explore more

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