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Mitochondrial fragmentation is a novel feature of adherent‐invasive <i>E. coli</i> evoked pathophysiology in enteric epithelia

2017· article· en· W4389021678 on OpenAlexafffundabout
Nicole L. Mancini, Arthur Wang, Jane Shearer, Derek M. McKay

Bibliographic record

VenueThe FASEB Journal · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsUniversity of Calgary
FundersCanadian Institutes of Health Research
KeywordsMitochondrionBiologyCell biologyMitochondrial fissionmitochondrial fusionFragmentation (computing)OrganelleApoptosisMitochondrial apoptosis-induced channelInner mitochondrial membraneMitochondrial DNABiochemistry

Abstract

fetched live from OpenAlex

Introduction Mitochondria are not distinct organelles; they exist as a dynamic network that constantly remodels via the processes of fission and fusion to meet the cells energy demands and allow recycling of damaged mitochondria. Mitochondrial dysfunction has been described in inflammatory bowel disease, where adherent‐invasive E. coli (AIEC) have been described as a pathobiont that can drive epithelial apoptosis. Little is known of microbial regulation of enterocytic mitochondrial dynamics and nothing of the potential of AIEC to perturb the critical metabolic function that mitochondria fulfill for the cell. Hypothesis AIEC induce mitochondrial fragmentation in intestinal epithelial cells in an invasion‐dependent manner that requires ROS, and drives the loss of epithelial permeability. Aim Explore the relationship between mitochondrial dynamics and epithelial function in vitro and determine if, then how, infection with AIEC affects mitochondrial dynamics and any consequence for epithelial barrier function. Methods Human colon‐derived epithelial lines were cultured with AIEC or a non‐invasive E. coli and readouts assessed: (a) visualization of mitochondria morphology and membrane potential with confocal microscopy; (b) immunoblotting of whole cell protein extracts for the mitochondrial fusion protein Optic Atrophy Factor 1 (OPA1); (c) ROS neutralized by the antioxidants; (d) treatment with spent medium from bacterial cultures; and, (e) blockade of fission using specific pharmacological inhibitors and measurement of epithelial permeability in response to AIEC. Results AIEC infection resulted in reduced mitochondrial membrane potential and ATP, and dramatic mitochondrial fragmentation accompanied by OPA1 cleavage in gut epithelia in a time‐ and dose‐dependent manner. The mitochondrial fragmentation was not reproduced by exposure to AIEC conditioned medium and was not abrogated by treatment with a general (vitamin C) or a mitochondrial‐specific (mitoTEMPO) anti‐oxidant co‐treatment. Invasion of epithelial cells by AIEC and transepithelial resistance were unaffected by co‐treatment with pharmacological inhibitor of mitochondria fission. Conclusion As a putative cause or contributor to Crohn's disease, AIEC were found to drive massive mitochondrial fragmentation in model gut epithelia independent of ROS generation or AIEC soluble factors. Neither the invasion of the E. coli nor the increase in paracellular permeability they evoke is sensitive to treatment with inhibitors of mitochondrial fission. Support or Funding Information Acknowledgements: Supported by: CIHR operating grant to DMM, U. Calgary Eyes High Doctoral Studentship to NLM.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.273
Teacher spread0.259 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2017
Admission routes3
Has abstractyes

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