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Genetic variation in the sucrase‐isomaltase ( <i>SI)</i> gene is associated with dietary intake in a young adult population

2016· article· en· W4389024965 on OpenAlexaffabout
Riva Sorkin, Thomas M.S. Wolever, Ahmed El‐Sohemy

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicDigestive system and related health
Canadian institutionsUniversity of Toronto
Fundersnot available
KeywordsSingle-nucleotide polymorphismMinor allele frequencyGenotypeGenetic variationPopulationGenetic variabilityBiologyMedicineGeneticsEndocrinologyGeneEnvironmental health

Abstract

fetched live from OpenAlex

Background Genetic variation contributes to individual differences in energy and nutrient intake and may be a contributing factor to the selection of certain foods and macronutrient preference. Sucrase‐isomaltase is a brush border enzyme encoded by the SI gene and plays an important role in starch digestion. Research on genetic variation in SI has mostly focused on rare mutations that result in congenital sucrase‐isomaltase deficiency, a severe digestive disorder. The objective of this study was to determine whether common variants in the SI gene are associated with habitual dietary intake. Methods Fasting blood samples were drawn from a total of 1,400 ethno‐culturally diverse participants aged 20–29 years from the Toronto Nutrigenomics and Health Study for genotyping of 5 single nucleotide polymorphisms (SNPs) in the SI gene: rs4557160 (C &gt; T), rs7649108 (C &gt;T), rs9756306 (G &gt;A), rs12496714 (A &gt;T) and rs13069478 (C &gt;T). Dietary intake was assessed using a one‐month, 196‐item Toronto‐modified Willett food frequency questionnaire. The prevalence of the SI gene variants was compared using χ 2 . An analysis of covariance adjusted for age, sex, ethnicity, BMI, and physical activity was used to determine the association between SI genotypes and dietary intake. Results Among Caucasians rs9756306 and rs12496714 were associated with total energy intake. Carriers of the minor allele had significantly higher energy intakes 2112 vs. 1194 kcal/day, p = 0.02 and 2011 vs. 1990 kcal/day, p = 0.03 respectively). The rs7649108 SNP was associated with starch consumption, whereby carriers of the minor allele had a significantly lower starch intake (115.8 vs. 120.9 g starch/day, p = 0.02). No associations were observed between rs4557160, rs13069479 and dietary intake. Conclusion Polymorphisms in the SI gene are associated with dietary intake patterns. Identifying the genetic determinants of dietary intake and food preference may enhance our understanding of excessive caloric intake and obesity, a common risk factor of many chronic conditions. Support or Funding Information Research support from Mitacs, Prof. Ahmed El‐Sohemy

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.328
Threshold uncertainty score0.224

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.229
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2016
Admission routes2
Has abstractyes

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