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Impact of Dietary Fat on Murine Gut Microbiota and Fatty Liver

2016· article· en· W4389025314 on OpenAlexafffund
Yue Shang, Hooman Derakhshani, Lindsei K. Sarna, Yaw L. Siow, Ehsan Khafipour, O Karmin

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsAgriculture and Agri-Food CanadaUniversity of ManitobaSt. Boniface Hospital
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health Research
KeywordsGut floraFatty liverObesityBiologyInternal medicineDysbiosisRuminococcusEndocrinologyPhysiologyMedicineDiseaseImmunology

Abstract

fetched live from OpenAlex

Overconsumption of fat‐rich diets is a potential risk for obesity and metabolic disease such as non‐alcoholic fatty liver disease (NAFLD). Gut microbiota is an important factor that plays a role in regulating energy homeostasis and body weight control. An obesity‐associated gut microbiota can be induced by a high‐fat diet (HFD). Dietary intervention is one of the approaches for obesity management. The aim of our study was to investigate the impact of dietary fat intervention on the composition of gut microbiota. Male C57BL/6J mice were fed a control (10% kcal fat) or a HFD (60% kcal fat) for 7 weeks. A third group of mice was fed a HFD for 5 weeks followed by a control diet for 2 weeks (HFD + Control). DNA was extracted from cecal and colonic mucosa samples for amplification of V4 region of bacterial 16S rRNA genes and subjected to Illumina sequencing. Bioinformatics analyses were performed using QIIME. Statistical difference was determined by one‐way ANOVA and Permutational MANOVA at P < 0.05. At the end of 7 week trial, body weight gain of the control or the HFD+Control group was significantly lower than that of the HFD. Significant differences were observed on richness, abundance, diversity and functional properties of the gut microbiota in cecal and colonic mucosa between the control and the HFD group. The HFD+Control diet partially shifted microbiota profile to the control and reduced hepatic lipid accumulation. In conclusion, our results suggested that 5‐week HFD induced obesity‐associated microbiota. Withdrawal of HFD could prevent excess body weight gain and attenuated fatty liver while only partially restored the composition, diversity and profile of gut microbiota. Support or Funding Information The study was supported, in part, by NSERC, CIHR and St. Boniface Hospital Research Centre.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.270
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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