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Phosphorylation of yeast glycerol 3‐phosphate acyltransferase Gpt2 regulates the timing of TAG synthesis and lipid droplet morphology

2016· article· en· W4389026311 on OpenAlexafffundabout
Marjan Tavassoli, Bernadette Nagler, Brittney Shabits, Patrick Sipila, Karin Athenstaedt, Vanina Zaremberg

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicLipid metabolism and biosynthesis
Canadian institutionsUniversity of Calgary
FundersNatural Sciences and Engineering Research Council of CanadaAustrian Science Fund
KeywordsPhosphatidic acidBiochemistryAcyltransferaseAcyltransferasesSerineGlycerolChemistryBiologyOleic acidPhosphorylationBiosynthesisPhospholipidEnzyme

Abstract

fetched live from OpenAlex

Glycerol‐3‐phosphate acyltransferases catalyze the acylation of glycerol‐3‐phosphate at the sn‐1 position yielding 1‐acyl glycerol‐3‐phosphate (lyso‐phosphatidic acid). This is the first and rate limiting reaction in de‐novo synthesis of phosphatidic acid (PA), the key intermediate for the formation of all glycerophospholipids and triacylglycerols. In all eukaryotic organisms glycerol‐3‐phosphate acyltransferases as well as acyltransferases catalyzing the subsequent acylation reaction converting lyso‐PA to PA occur in redundancy. This led to the hypothesis that isoenzymes are forming different PA pools which supply different pathways. In the model organism yeast Saccharomyces cerevisiae two glycerol‐3‐phosphate acyltransferases have been identified, Gpt2 (Gat1) and Sct1 (Gat2). Most recently we demonstrated the important role of Gpt2 (but not Sct1) in cells challenged by oleic acid as the only carbon source. Whereas growth in oleic acid containing medium induced massive lipid particle accumulation in wild‐type cells, cells lacking GPT2 failed to accumulate these storage compartments of triacylglycerols and other non‐polar lipids, exhibited a strong growth defect and cell viability was significantly reduced. We were intrigued by the fact that the intracellular distribution of Gpt2 and its phosphorylation status changed under these growth condition compared to growth on glucose containing medium. We have identified several phosphorylation sites in Gpt2 by mass spectrometry, which are localized to a serine rich region in the carboxy‐terminus of the protein. Serine to alanine or to aspartate mutations as well as deletion of the serine rich region containing these residues, were introduced in the yeast genome to investigate the role of phosphorylation in the regulation of Gpt2. Importantly, all phosphorylation mutants were able to support life of cells lacking Sct1, indicating these mutants are functional. We show that manipulations of Gpt2 phosphorylation status strongly and specifically affect TAG accumulation, but not metabolism of the most abundant glycerophospholipids during late log phase of growth. Importantly, alterations in the TAG content are accompanied by marked changes in lipid droplet morphology in the respective mutants. Altogether our results support a role for Gpt2 phosphorylation in regulating the timing of TAG synthesis and lipid droplet morphology. Support or Funding Information This work has been financially supported by the Natural Sciences and Engineering Research Council of Canada (to VZ and BS) and the Austrian Science Fund (FWF; Project P21251 to KA).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.214
Teacher spread0.204 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes3
Has abstractyes

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