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Characterization of Spontaneous Chondrogenesis During Tail Regeneration of the Leopard Gecko ( <i>Eublepharis macularius</i> )

2016· article· en· W4389034109 on OpenAlexafffund
Noeline Subramaniam, Kathy Jacyniak, Rebecca McDonald, Matthew K. Vickaryous

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldMedicine
TopicOsteoarthritis Treatment and Mechanisms
Canadian institutionsUniversity of Guelph
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsChondrogenesisBlastemaRegeneration (biology)Cell biologyCartilageAnatomyBiologySOX9ChemistryTranscription factorGeneticsGene

Abstract

fetched live from OpenAlex

Many lizards are capable of spontaneous tail regeneration following tail loss. Although the regenerate tail superficially resembles the original, it is not identical. One of the main differences is that a cartilaginous cone replaces the original bony vertebrae of the axial skeleton. Here we characterize spontaneous chondrogenesis during tail regeneration in the leopard gecko. Following tail loss, the first sign of regenerative outgrowth is the formation of a blastema, an aggregation of proliferating mesenchymal‐like cells localized at the site of tail loss. Cartilage regeneration begins within the blastema 8–14 days post‐injury. Presumptive cartilage first appears as a glycosaminoglycan (GAG) and type II collagen (Col2) positive condensation that surrounds the newly regenerating spinal cord. With continued regenerative outgrowth, this condensation forms a hollow cone‐like structure. Presumptive cartilage cells express phosphorylated Smad2 (pSmad2), indicating activation of the canonical transforming growth factor beta (TGFβ) signalling pathway. Curiously, early pSmad2 expression is not matched by TGFβ1 or TGFβ3 expression, indicating that a different member of the TFGβ pathway is involved in early chondrogenesis. Furthermore, the transcription factor Sox9, often described as the master regulator of chondrogenesis, is not expressed until several days after the first appearance of Col2 and GAG in the newly forming tail. Chondrogenesis is complete within ~30 days, yielding a distinctly cell‐rich/matrix‐poor structure. Our findings indicate that regeneration‐mediated chondrogenesis in the lizard tail is not a simple recapitulation of embryonic cartilage development. Support or Funding Information Natural Sciences and Engineering Research Council (NSERC) Discovery Grant 400358

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.207
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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