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Record W4391061702 · doi:10.1093/jtm/taae010

Intestinal protozoa in returning travellers: a GeoSentinel analysis from 2007 to 2019

2024· article· en· W4391061702 on OpenAlexafffund
Thomas Weitzel, Ashley F. Brown, Michael Libman, Cecilia Perret, Ralph Huits, Lin H. Chen, Daniel T. Leung, Karin Leder, Bradley A. Connor, Marta Díaz‐Menéndez, Hilmir Ásgeirsson, Eli Schwartz, Fernando Salvador, Denis Malvy, M. Saio, Francesca Norman, Bhawana Amatya, Alexandre Duvignaud, Stephen Vaughan, Marielle Glynn, Carsten Schade Larsen, Christian Wejse, Martin P. Grobusch, Abraham Goorhuis, Emmanuel Bottieau, Marc Shaw, Annemarie Hern, Watcharapong Piyaphanee, Wasin Matsee, José Muñóz, Israel Molina, Frank P. Mockenhaupt, Francesco Castelli, Alberto Matteelli, Christina Coyle, Paul Kelly, Cosmina Zeana, Simin Aysel Florescu, Corneliu Petru Popescu, Susan Kuhn, Susan Anderson, Kunjana Mavunda, Carmelo Licitra, François Chappuis, Gilles Éperon, Jesse J. Waggoner, Henry H. L. Wu, Sabine Jordan, Johnnie Yates, Phi Truong Hoang Phu, Prativa Pandey, Michael Beadsworth, José A. Pérez‐Molina, Philippe Gautret, Émilie Javelle, Noreen A. Hynes, Elizabeth D. Barnett, Dan Bourque, Ann Settgast, Christina Greenaway, Sapha Barkati, Cédric P. Yansouni, Arpita Chakravarti, Camilla Rothe, Mirjam Schunk, Federico Gobbi, Nancy Piper Jenks, Marina Rogova, John D. Cahill, Ben Wyler, Frank Patterson, Anne Marie McCarthy, Éric Caumes, Oula Itani, Els van Nood, Hedvig Glans, Mugen Ujiie, Satoshi Kutsuna, Shaun K. Morris, Kescha Kazmi, Terri Sofarelli, Katherine Plewes, Yazdan Mirzanejad, Pierre Plourde, Jacquie Shackel, Yukihiro Yoshimura, Natsuo Tachikawa, Patricia Schlagenhauf, Annelies Zinkernage, Kristina M Angelo

Bibliographic record

VenueJournal of Travel Medicine · 2024
Typearticle
Languageen
FieldMedicine
TopicTravel-related health issues
Canadian institutionsSouth Health CampusUniversity of CalgaryMcGill University Health Centre
FundersNational Health and Medical Research CouncilPublic Health Agency of CanadaNational Institutes of HealthMedical Research CouncilPublic Health AgencyCenters for Disease Control and PreventionInternational Society of Travel Medicine
KeywordsMedicineProtozoaVirologyMicrobiology

Abstract

fetched live from OpenAlex

BACKGROUND: Prolonged diarrhoea is common amongst returning travellers and is often caused by intestinal protozoa. However, the epidemiology of travel-associated illness caused by protozoal pathogens is not well described. METHODS: We analysed records of returning international travellers with illness caused by Giardia duodenalis, Cryptosporidium spp., Cyclospora cayetanensis or Cystoisospora belli, reported to the GeoSentinel Network during January 2007-December 2019. We excluded records of travellers migrating, with an unascertainable exposure country, or from GeoSentinel sites that were not located in high-income countries. RESULTS: There were 2517 cases, 82.3% giardiasis (n = 2072), 11.4% cryptosporidiosis (n = 287), 6.0% cyclosporiasis (n = 150) and 0.3% cystoisosporiasis (n = 8). Overall, most travellers were tourists (64.4%) on long trips (median durations: 18-30 days). Cryptosporidiosis more frequently affected people < 18 years (13.9%) and cyclosporiasis affected people ≥ 40 years (59.4%). Giardiasis was most frequently acquired in South Central Asia (45.8%) and sub-Saharan Africa (22.6%), cryptosporidiosis in sub-Saharan Africa (24.7%) and South-Central Asia (19.5%), cyclosporiasis in South East Asia (31.3%) and Central America (27.3%), and cystoisosporiasis in sub-Saharan Africa (62.5%). Cyclosporiasis cases were reported from countries of uncertain endemicity (e.g. Cambodia) or in countries with no previous evidence of this parasite (e.g. French Guiana). The time from symptom onset to presentation at a GeoSentinel site was the longest amongst travellers with giardiasis (median: 30 days). Over 14% of travellers with cryptosporidiosis were hospitalized. CONCLUSIONS: This analysis provides new insights into the epidemiology and clinical significance of four intestinal protozoa that can cause morbidity in international travellers. These data might help optimize pretravel advice and post-travel management of patients with travel-associated prolonged gastrointestinal illnesses. This analysis reinforces the importance of international travel-related surveillance to identify sentinel cases and areas where protozoal infections might be undetected or underreported.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.067
Threshold uncertainty score0.133

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0040.005
Science and technology studies0.0000.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.032
GPT teacher head0.356
Teacher spread0.324 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2024
Admission routes2
Has abstractyes

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