MétaCan
Menu
Back to cohort

Deep Adaptive Transfer Learning for Site-Specific PET Attenuation and Scatter Correction from Multi-National/Institutional Datasets

2022· article· en· W4391248914 on OpenAlexaffabout
Isaac Shiri, Yazdan Salimi, Mehdi Maghsudi, Ghasem Hajianfar, Esmail Jafari, Rezvan Samimi, Maziar Khateri, Peyman Sheikhzadeh, Parham Geramifar, Habibollah Dadgar, Ahmad Bitrafan Rajabi, Majid Assadi, François Bénard, Carlos Uribe, Arman Rahmim, Habib Zaidi

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldMedicine
TopicMedical Imaging Techniques and Applications
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsDeep learningArtificial intelligenceTransfer of learningComputer scienceGeneralizability theoryMachine learningPattern recognition (psychology)Nuclear medicineMathematicsMedicineStatistics

Abstract

fetched live from OpenAlex

Attenuation and scatter correction (ASC) must be performed for quantitative PET imaging. ASC is a challenging task in PET-only and PET/MRI systems. Different single-center or scanner-specific studies have been performed by using deep learning (DL) algorithms. However, the generalizability of these models is limited. In addition, providing large datasets for data-hungry DL models is a bottleneck. However, a universal model may not perform very well for each center because of high variability across different centers in scanners and image acquisition and reconstruction protocols. Therefore, we aimed to apply deep transfer learning for site-specific PET ASC utilizing a multi-center dataset. Altogether, 43068Ga-PSMA/DOTA PET/CT images from three countries (Switzerland, Iran, and Canada), including eight different centers, were enrolled in this study. In all centers, PET images were corrected by using CT images for ASC. In addition, we implemented a deep supervised U-Net network architecture, U2Net, as the core DL model. Different scenarios were investigated in this study, including (i) training and testing models for each center separately: center-based (CeBa); (ii) training and testing models using the entirety of the dataset: centralized (CeZe); i.e., entire data pooled together; and (iii) transfer learning (TrLe) where training was performed using pooled data to one server using entire dataset and then TrLe were performed for each center separately to build site-specific models for each center. In terms of absolute relative error (ARE%), CeBa, CeZe, and TrLe achieved 36 ± 13 (CI95%: 33 to 39), 31 ± 34 (CI95%: 24 to 38).Furthermore, using TrLe outperformed the centralized and center-based models in terms of accurate ASC image generation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.020
Threshold uncertainty score0.040

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.005
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0020.002
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.052
GPT teacher head0.313
Teacher spread0.261 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes2
Has abstractyes

Explore more

Same topicMedical Imaging Techniques and ApplicationsFrench-language works237,207