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Record W4391450121 · doi:10.1101/2024.01.29.577477

Behavioural responses to acute warming precede critical shifts in the cellular and physiological thermal stress responses in fish

2024· preprint· en· W4391450121 on OpenAlexafffund
Travis C. Durhack, Matt J. Thorstensen, Theresa E. Mackey, Mélanie Aminot, Michael Lawrence, Céline Audet, Eva C. Enders, Ken M. Jeffries

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldEnvironmental Science
TopicPhysiological and biochemical adaptations
Canadian institutionsUniversity of WinnipegUniversité de MonctonInstitut National de la Recherche ScientifiqueUniversity of ManitobaUniversité du Québec à RimouskiFisheries and Oceans Canada
FundersFisheries and Oceans CanadaNatural Sciences and Engineering Research Council of CanadaGenome Canada
KeywordsTranscriptomeSalvelinusCritical thermal maximumBiologyAcclimatizationFight-or-flight responseHeat shockHeat shock proteinCellular stress responseTroutFish <Actinopterygii>EcologyOxidative stressRespirometryZoologyGene expressionGeneGeneticsEndocrinologyBiochemistryFishery

Abstract

fetched live from OpenAlex

Abstract From a conservation perspective, it is important to identify when sub-lethal temperatures begin to adversely impact an organism. However, it is unclear whether, during acute exposures, these cellular thresholds occur at similar temperatures to other physiological or behavioural changes. To test this, we estimated temperature preference (15.1 ± 1.1 °C) using a shuttle box, thermal optima for aerobic scope (10–15 °C) using respirometry, agitation temperature (22.0 ± 1.4 °C) as the point where a fish exhibits a behavioural avoidance response and the CT max (28.2 ± 0.4 °C) as the upper thermal limit for 1 yr old Brook Trout ( Salvelinus fontinalis ) acclimated to 10 °C. We then acutely exposed a different subset of fish to these temperatures and sampled tissues when they reached the target temperature or after 60 min of recovery at 10 °C. We used qPCR to estimate mRNA transcript levels of genes associated with heat shock proteins, oxidative stress, apoptosis, and inducible transcription factors. A major shift in the transcriptome response occurred near the agitation temperature, which may identify a link between the cellular stress response and the behavioural avoidance response.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.034
GPT teacher head0.260
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

Explore more

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