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Record W4391694649 · doi:10.1101/2024.02.09.24302539

A GWAS for grip strength in cohorts of children – advantages of analysing young participants for this trait

2024· preprint· en· W4391694649 on OpenAlexfundno aff
Filippo Abbondanza, Carol A. Wang, Judith Schmitz, Craig E. Pennell, Andrew Whitehouse, Silvia Paracchini

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Associations and Epidemiology
Canadian institutionsnot available
FundersCanadian Institutes of Health ResearchGillings School of Public HealthMurdoch UniversityUniversity of Notre Dame AustraliaGovernment of Western AustraliaEdith Cowan UniversityNational Health and Medical Research CouncilWomen and Infants Research FoundationRaine Medical Research FoundationDeutsche ForschungsgemeinschaftUniversity of BristolAustralian GovernmentCurtin University of TechnologyWellcome TrustMedical Research CouncilUniversity of Notre Dame
KeywordsConfoundingGrip strengthGenome-wide association studyHeritabilityMedicineDemographyCohortGenetic associationBiobankInternal medicineBiologyPhysical therapySingle-nucleotide polymorphismGeneticsGenotypeGene

Abstract

fetched live from OpenAlex

Abstract Grip strength (GS) is a proxy measure for muscular strength and a predictor for bone fracture risk among other diseases. Previous genome-wide association studies (GWAS) have been conducted in large cohorts of adults focusing on scores collected for the dominant hand, therefore increasing the likelihood of confounding effects by environmental factors. Here, we perform the first GWAS meta-analyses on maximal GS with the dominant (GSD) and non-dominant (GSND) hand in two cohorts of children (ALSPAC, N = 5,450; age range = 10.65 – 13.61; Raine Study, N = 1,162, age range: 9.42-12.38 years). We identified a novel significant association for GSND (rs9546244, LINC02465 , p = 3.43e-08 ) and replicated associations previously reported in adults including with a HOXB3 gene marker that shows an eQTL effect. Despite a much smaller sample (∼3%) compared to the UK Biobank we replicated correlation and polygenic risk score (PRS) analyses previously reported in this much larger adult cohort. Specifically, we observed genetic correlations with coronary artery disease and a PRS association with the risk of overall fracture. Furthermore, we observed a higher SNP-heritability (24-41%) compared to previous studies (4-24%) in adults. Our results suggest that cohorts of children might be better suited for genetic studies of grip strength, possibly due to the shorter exposure to confounding environmental factors compared to adults.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.010
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0040.010
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.003
Bibliometrics0.0010.002
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.323
Teacher spread0.300 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

Same venuemedRxiv→Same topicGenetic Associations and Epidemiology→French-language works237,207→