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Record W4391756091 · doi:10.1038/s41592-023-02151-z

Metrics reloaded: recommendations for image analysis validation

2024· review· en· W4391756091 on OpenAlexafffund
Lena Maier‐Hein, Annika Reinke, Patrick Godau, Minu D. Tizabi, Florian Buettner, Evangelia Christodoulou, Ben Glocker, Fabian Isensee, Jens Kleesiek, Michal Kozubek, Mauricio Reyes, Michael A. Riegler, Manuel Wiesenfarth, A. Emre Kavur, Carole H. Sudre, Michael Baumgartner, Matthias Eisenmann, Doreen Heckmann-Nötzel, Tim Rädsch, Laura Ación, Michela Antonelli, Tal Arbel, Spyridon Bakas, Arriel Benis, Matthew B. Blaschko, M. Jorge Cardoso, Veronika Cheplygina, Beth A. Cimini, Gary S. Collins, Keyvan Farahani, Luciana Ferrer, Adrián Galdrán, Bram van Ginneken, Robert Haase, Daniel A. Hashimoto, Michael M. Hoffman, Merel Huisman, Pierre Jannin, Charles E. Kahn, Dagmar Kainmueller, Bernhard Kainz, Alexandros Karargyris, Alan Karthikesalingam, Florian Kofler, Annette Kopp‐Schneider, Anna Kreshuk, Tahsin Kurç, Bennett A. Landman, Geert Litjens, Amin Madani, Klaus Maier‐Hein, Anne L. Martel, Peter Mattson, Erik Meijering, Bjoern Menze, Karel G. M. Moons, Henning Müller, Brennan Nichyporuk, Felix Nickel, Jens Petersen, Nicola Rieke, Julio Sáez-Rodríguez, Clara I. Sá‎nchez, Shravya Shetty, Maarten van Smeden, Ronald M. Summers, Abdel Aziz Taha, Aleksei Tiulpin, Sotirios A. Tsaftaris, Ben Van Calster, Gaël Varoquaux, Paul F. Jäger

Bibliographic record

VenueNature Methods · 2024
Typereview
Languageen
FieldMedicine
TopicArtificial Intelligence in Healthcare and Education
Canadian institutionsSunnybrook Health Science CentreVector InstitutePrincess Margaret Cancer CentreMila - Quebec Artificial Intelligence InstituteUniversity of TorontoUniversity Health NetworkMcGill University
FundersNational Institute of General Medical SciencesNational Cancer InstituteMedical Research CouncilNational Institutes of HealthMasarykova UniverzitaNovo Nordisk FondenUniversidad de Buenos AiresUniversity of PennsylvaniaNovo NordiskKU LeuvenUniversity of OxfordCancer Research UKUniversity College LondonUniversitetet i TromsøKing's College LondonOulun YliopistoSchweizerischer Nationalfonds zur Förderung der Wissenschaftlichen ForschungNational Institute of Neurological Disorders and StrokeCanadian Institute for Advanced ResearchRoyal Academy of EngineeringNederlandse Organisatie voor Wetenschappelijk OnderzoekNIH Clinical CenterAgence Nationale de la RechercheInnosuisse - Schweizerische Agentur für InnovationsförderungAlzheimer's SocietySchool of Medicine, Indiana UniversityEuropean CommissionSilicon Valley Community FoundationBroad InstituteUniversity of BernSydäntutkimussäätiöDeutsches KrebsforschungszentrumNatural Sciences and Engineering Research Council of CanadaConsejo Nacional de Investigaciones Científicas y TécnicasFoundation for Cardiovascular ResearchMcGill UniversityNational Science Foundation
KeywordsComputer scienceProcess (computing)Metric (unit)Representation (politics)Domain (mathematical analysis)Fingerprint (computing)Machine learningData miningObject (grammar)SegmentationArtificial intelligenceConvergence (economics)Selection (genetic algorithm)Image (mathematics)AlgorithmMathematics

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.077
metaresearch head score (Gemma)0.200
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.923
Threshold uncertainty score0.408

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0770.200
Meta-epidemiology (narrow)0.0040.002
Meta-epidemiology (broad)0.0090.007
Bibliometrics0.0150.010
Science and technology studies0.0010.004
Scholarly communication0.0100.010
Open science0.0110.006
Research integrity0.0070.009
Insufficient payload (model declined to judge)0.0100.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.489
GPT teacher head0.683
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
DomainMethods
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations398
Published2024
Admission routes2
Has abstractno

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