MétaCan
Menu
Back to cohort
Record W4392169739 · doi:10.1111/tpj.16676

Variation of <scp><i>TaMyb10</i></scp> and their function on grain color and pre‐harvest sprouting resistance of wheat

2024· article· en· W4392169739 on OpenAlexaff
Jing Lang, Huayu Jiang, Mengping Cheng, Ming‐Wei Wang, Jing Gu, Xiaojiang Guo, Qian Chen, Jirui Wang

Bibliographic record

VenueThe Plant Journal · 2024
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicCrop Yield and Soil Fertility
Canadian institutionsMinistry of Agriculture
FundersNational Key Research and Development Program of ChinaNational Natural Science Foundation of China
KeywordsSproutingVariation (astronomy)Resistance (ecology)BiologyBotanyAgronomyPhysics

Abstract

fetched live from OpenAlex

SUMMARY Pre‐harvest sprouting (PHS) is a significant threat to global food security due to its association with losses in both yield and quality. Among the genes involved in PHS resistance in wheat, PHS‐3D ( TaMyb10‐D ) plays a crucial role. Here, we characterized the sequence variations of TaMyb10 genes in 416 bread wheat and 302 Aegilops tauschii accessions. Within TaMyb10‐A sequences, we identified a deletion ranging from 214 to 305 bp in the signal and amino acid coding region, present in 61.3% of the accessions. Similarly, 79.3% of the TaMyb10‐B sequences within the third exon region exhibited a 19 bp deletion. Additionally, 40.8% of the accessions lacked the 2.4 Mb fragment (in/del mutations) on Chr3D, where TaMyb10‐D / PHS‐3D was located. Interestingly, the geographical distribution of accessions showed little correlation with the divergence of TaMyb10 . TaMyb10‐A‐III Dele , TaMyb10‐B‐IV Dele , and TaMyb10‐D‐V Dele genotypes were prevalent in wheat populations across continents. Despite their structural variations, the five distinct protein types exhibited comparable ability to bind the promoters of downstream genes in the flavonoid and ABA pathways, such as CHS , DFR , and NCED . Furthermore, the combination of TaMyb10 homologs was significantly associated with grain color and germination percentages. Accessions exclusively harboring TaMyb10‐D displayed red seed color and reduced germination percentages, indicating the predominant role of TaMyb10‐D compared to TaMyb10‐A and TaMyb10‐B . This comprehensive investigation enhances our understanding of the structural variations and functional divergence of TaMyb10 , providing valuable insights and resources for improving PHS resistance in wheat.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.980
Threshold uncertainty score0.120

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.199
Teacher spread0.180 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueThe Plant JournalSame topicCrop Yield and Soil FertilityFrench-language works237,207