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Record W4392241449 · doi:10.3390/radiation4010005

Deep Texture Analysis—Enhancing CT Radiomics Features for Prediction of Head and Neck Cancer Treatment Outcomes: A Machine Learning Approach

2024· article· en· W4392241449 on OpenAlexafffund
Aryan Safakish, Lakshmanan Sannachi, Amir Moslemi, Ana Pejović‐Milić, Gregory J. Czarnota

Bibliographic record

VenueRadiation · 2024
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of TorontoHealth Sciences CentreToronto Metropolitan UniversitySunnybrook Health Science Centre
FundersNatural Sciences and Engineering Research Council of CanadaTerry Fox Research InstituteUniversity of TorontoCanadian Institutes of Health ResearchTerry Fox Foundation
KeywordsRadiomicsReceiver operating characteristicArtificial intelligenceSupport vector machineHead and neck cancerMedicineComputer scienceClassifier (UML)Radiation treatment planningPattern recognition (psychology)Head and neckMachine learningCancerRadiologyRadiation therapyInternal medicineSurgery

Abstract

fetched live from OpenAlex

(1) Background: Some cancer patients do not experience tumour shrinkage but are still at risk of experiencing unwanted treatment side effects. Radiomics refers to mining biomedical images to quantify textural characterization. When radiomics features are labelled with treatment response, retrospectively, they can train predictive machine learning (ML) models. (2) Methods: Radiomics features were determined from lymph node (LN) segmentations from treatment-planning CT scans of head and neck (H&N) cancer patients. Binary treatment outcomes (complete response versus partial or no response) and radiomics features for n = 71 patients were used to train support vector machine (SVM) and k-nearest neighbour (k-NN) classifier models with 1–7 features. A deep texture analysis (DTA) methodology was proposed and evaluated for second- and third-layer radiomics features, and models were evaluated based on common metrics (sensitivity (%Sn), specificity (%Sp), accuracy (%Acc), precision (%Prec), and balanced accuracy (%Bal Acc)). (3) Results: Models created with both classifiers were found to be able to predict treatment response, and the results suggest that the inclusion of deeper layer features enhanced model performance. The best model was a seven-feature multivariable k-NN model trained using features from three layers deep of texture features with %Sn = 74%, %Sp = 68%, %Acc = 72%, %Prec = 81%, %Bal Acc = 71% and with an area under the curve (AUC) the receiver operating characteristic (ROC) of 0.700. (4) Conclusions: H&N Cancer patient treatment-planning CT scans and LN segmentations contain phenotypic information regarding treatment response, and the proposed DTA methodology can improve model performance by enhancing feature sets and is worth consideration in future radiomics studies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.766
Threshold uncertainty score0.481

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.303
Teacher spread0.292 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations7
Published2024
Admission routes2
Has abstractyes

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