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Record W4392590261 · doi:10.1016/j.gimo.2024.101170

P274: A case of IPEX syndrome caused by a novel mutation in FOXP3 gene, and exhibited abnormal osseous findings

2024· article· en· W4392590261 on OpenAlexaff
Duha Hejla, Cornelius F. Boerkoel

Bibliographic record

VenueGenetics in Medicine Open · 2024
Typearticle
Languageen
FieldMedicine
TopicOtitis Media and Relapsing Polychondritis
Canadian institutionsB.C. Women's Hospital & Health CentreBC Children's HospitalUniversity of British Columbia
Fundersnot available
KeywordsMutationGeneGeneticsMedicineDermatologyBiology

Abstract

fetched live from OpenAlex

IPEX (Immune Dysregulation Polyendocrinopathy Enteropathy X-linked) syndrome is a genetic disorder characterized by immune system dysfunction. Pathogenic variants in FOXP3 cause improper functioning of regulatory T cells (Tregs) resulting autoimmune symptoms such as enteropathy, type1 diabetes mellitus, autoimmune thyroid disease, dermatitis, cytopenia, and nephropathy. The patient was born via emergency cesarean section to a 32-year-old mother who had a family history of recurrent male fetal demise. Prenatal whole exome sequencing revealed a novel genetic variant in FOXP3 (NM_014009.4:c.142C>T, p.(Arg48*)), which was classified as 'likely pathogenic.' The mother was enrolled into research and, throughout the pregnancy, was treated with sirolimus for fetal immunosuppression. The patient was born prematurely at 28 weeks of gestation and treated with intravenous immunoglobulin (IVIG), hydrocortisone, and sirolimus. The infant developed severe enteropathy with bloody diarrhea early in life. His blood glucose levels remained normal. Thyroid function tests, including thyroid- TSH, Free T4, and Free T3, were also within the normal range, and TPO antibody was negative. GAD-65 antibody was canceled due to an insufficient sample. Radiological findings of the proximal and distal humeral diaphyses showed abnormal heterogeneous density and areas of sclerosis, which are inconsistent with the typical bone disease of prematurity. Despite medical interventions the patient passed away at age three weeks. We are reporting a novel FOXP3 variant and a unique presentation of IPEX syndrome. Prenatal sirolimus did not prevent a severe phenotype. The absence of other endocrinopathies, despite the severe clinical presentation, is also distinct from the typical IPEX syndrome manifestations. Additionally, to our knowledge osseous changes have not been described and could represent an atypical manifestation associated with the novel FOXP3 variant.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.339
Threshold uncertainty score0.688

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.323
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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