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Record W4393010344 · doi:10.21203/rs.3.rs-4000880/v1

Impact of long-term storage on mid-infrared spectral patterns of serum and synovial fluid samples of dogs with osteoarthritis

2024· preprint· en· W4393010344 on OpenAlexaff
Sarah Malek, Federico Marini, J. Trenton McClure

Bibliographic record

VenueResearch Square · 2024
Typepreprint
Languageen
FieldMedicine
TopicInfrared Thermography in Medicine
Canadian institutionsUniversity of Prince Edward Island
Fundersnot available
KeywordsOsteoarthritisSynovial fluidTerm (time)InfraredMedicinePathologyPhysicsOpticsAstronomy

Abstract

fetched live from OpenAlex

<title>Abstract</title> The aim of this study was to evaluate the impact of short versus long-term storage on mid-infrared (MIR) spectral patterns of serum and synovial fluid (SF) of dogs with knee osteoarthritis (OA) and controls. Serum (52 OA and 49 control) and SF (51 OA and 51 control) samples from dogs that had been in short-term (&lt;3 years) frozen state (-80°C) had their MIR spectra obtained. The remaining aliquots were maintained in long-term (&gt;5 years) frozen state before having MIR spectra acquired under the same testing conditions. Spectra from the two time points were significantly different (<italic>P</italic>&lt;0.0001), however, sample aging accounted for only 1.61% and 2.98% of serum and SF profiles’ variability, respectively. Predictive models for discriminating serum of OA from controls for short-term storage showed 87.3±3.7% sensitivity, 88.9±2.4% specificity and 88.1±2.3% accuracy, while, for long-term storage, values of the same figures of merit were 92.5±2.6%, 97.1±1.7% and 94.8±1.4%, respectively. Predictive models based on short-term stored SF spectra had 97.3±1.6% sensitivity, 89.4±2.6% specificity and 93.4±1.6% accuracy, while the values for long-term storage 95.7±2.1%, 95.7±0.8% and 95.8±1.1%, respectively. Long-term storage of serum and does not significantly alter the performance of predictive algorithms for discriminating OA samples from controls.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.016
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.001
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.374
Teacher spread0.338 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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