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Record W4393097547 · doi:10.21203/rs.3.rs-4127121/v1

Exploring the Structural Diversity of Novel 3-Substituted Coumarins as Potent Inhibitors of Tumor-Associated Carbonic Anhydrases: Expanding the Pharmacological Space for Anticancer Drug Discovery

2024· preprint· en· W4393097547 on OpenAlexaff
Islam K. Matar, Sami A. Al‐Hussain, Zeinab A. Muhammad, Maha Al-Ali, Magdi E. A. Zaki, Sobhi M. Gomha, Ahmed El‐Khouly

Bibliographic record

VenueResearch Square · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicEnzyme function and inhibition
Canadian institutionsSaint Mary's UniversityMount Saint Vincent University
Fundersnot available
KeywordsChemical spaceDrugDrug discoveryDiversity (politics)Computational biologyChemistryPharmacologyBiologyCombinatorial chemistryBiochemistryPolitical science

Abstract

fetched live from OpenAlex

Abstract Background Innovations in cancer chemotherapy continue to occupy the priority list of demands to ensure our health security. The vast chemical space provides a plethora of anticancer discovery opportunities, however, limited by the boundaries of synthetic feasibility. Objective Expand the established pharmacological space of tumor-associated carbonic anhydrases by exploring the synthetically feasible chemical space of 3-substituted coumarins. Method A series of 52 novel 3-substituted coumarins were randomly sketched by our team of synthetic chemists with priority given to synthetic feasibility. The pharmacological potentials of the novel coumarin series were computationally estimated using a machine-learning approach exploiting both chemical and statistical inference. 17 members of the novel series were predicted to possess cytotoxic activity against HeLa cells by interfering with the tumor-associated carbonic anhydrases IX and XII. Those 17 compounds were synthesized and biologically tested against HeLa cells, subsequently; the 3 most potent compounds were assayed against carbonic anhydrases I, II, IX, and XII employing Acetazolamide as a reference. The molecular binding mechanism of those 3 chosen compounds with the four enzyme isoforms was studied using molecular docking simulation. Result Most of the compounds exhibited competent inhibitory activity against HeLa cells. The carbonic anhydrase inhibition results unveiled the powerful but non-selective nature of those suicide inhibitors. Conclusion Novel 3-substituted coumarins have been dispatched to join the pharmacological space of tumor-associated carbonic anhydrases’ suicide inhibitors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.104
GPT teacher head0.374
Teacher spread0.269 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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