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Record W4393408837 · doi:10.1117/12.3006650

CNN-derived brain age gaps of different neurological and cardiovascular diseases in the UK Biobank and identifying affected brain regions

2024· article· en· W4393408837 on OpenAlexaff
Elizabeth McAvoy, Matthias Wilms, Nils D. Forkert

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsOntario Brain InstituteUniversity of Calgary
Fundersnot available
KeywordsCohortBiobankMedicineBiomarkerNeuroimagingDiseaseCohort studyPhysical medicine and rehabilitationInternal medicineBioinformaticsPsychiatryBiology

Abstract

fetched live from OpenAlex

The difference between chronological age and predicted biological brain age, the so-called “brain age gap”, is a promising biomarker for assessment of overall brain health. It has also been suggested as a biomarker for early detection of neurological and cardiovascular conditions. The aim of this work is to identify group-level variability in the brain age gap between healthy subjects and patients with neurological and cardiovascular diseases. Therefore, a deep convolutional neural network was trained on UK Biobank T1-weighted-MRI datasets of healthy subjects (n=6860) to predict brain age. After training, the model was used to determine the brain age gap for healthy hold-out test subjects (n=344), and subjects with neurological (n=2327) or cardiovascular (n=6467) diseases. Next, saliency maps were analyzed to identify brain regions used by the model to render decisions. Linear bias correction was implemented to correct for the bias of age predictions made by the model. The trained model after bias correction achieved an average brain age gap of 0.05 years for the healthy test cohort while the neurological disease test cohort had an average brain age gap of 0.7 years, and the cardiovascular disease test cohort had an average brain age gap of 0.25 years. The average saliency maps appear similar for the three test group, suggesting that the model mostly uses brain areas associated with general brain aging patterns. This works results indicate potential in the brain age gap for differentiation of neurologic and cardiac patients from healthy aging patterns supporting its use as a novel biomarker.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.026
Threshold uncertainty score0.052

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.046
GPT teacher head0.272
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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