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Record W4393757681 · doi:10.5281/zenodo.6209170

Zooplankton functional trait database for Canadian lakes

2021· dataset· en· W4393757681 on OpenAlexaffabout
Beatrix E. Beisner, Cindy Paquette, Allain Barnett, Kerri Finlay, Marie‐Pier Hébert

Bibliographic record

VenueZenodo (CERN European Organization for Nuclear Research) · 2021
Typedataset
Languageen
FieldEnvironmental Science
TopicFish Ecology and Management Studies
Canadian institutionsMcGill UniversityUniversité du Québec à Montréal
Fundersnot available
KeywordsZooplanktonTraitDatabaseGeographyEcologyBiologyComputer science

Abstract

fetched live from OpenAlex

This dataset contains functional traits of 102 crustacean zooplankton taxa sampled in 624 Canadian lakes (Pelagic sample), as well as 58 sub-fossil cladoceran taxa (Sediments sample) sampled in 101 lakes. Lakes were sampled across Canada as part of the NSERC Canadian LakePulse Network. The traits used are: feeding type (B(Bosmina)-filtration, C(Chydorus)-filtration, D(Daphia)-filtration, S(Sidae)-filtration, stationary suspension or raptorial), habitat (littoral, pelagic or intermediate) and trophic group (carnivore, herbivore, omnivore, or a combination of these). Pelagic species length of up to 10 individuals per taxon per lake were measured by BSA Environmental Services (Ohio, U.S.A.), and averaged for each taxon. Sediments sample lengths were either obtained from the literature (Demott & Kerfoot, 1982; Barnett et al., 2007; Griffiths et al., 2019), or from the Pelagic sample length data. Feeding type, habitat and trophic group functional traits were obtained from literature (Demott & Kerfoot, 1982; Barnett et al., 2007; Hébert et al., 2016; Griffiths et al., 2019). References Barnett, A. J., Finlay, K., & Beisner, B. (2007). Functional diversity of crustacean zooplankton communities: Towards a trait-based classification. Freshwater Biology, 52(5), 796–813. https://doi.org/10.1111/j.1365-2427.2007.01733.x Demott, W. R., & Kerfoot, W. C. (1982). Competition among cladocerans: nature of the interaction between Bosmina and Daphnia. Ecology, 63(6), 1949–1966. https://doi.org/10.2307/1940132 Griffiths, K., Winegardner, A. K., Beisner, B. E., & Gregory-Eaves, I. (2019). Cladoceran assemblage changes across the Eastern United States as recorded in the sediments from the 2007 National Lakes Assessment, USA. Ecological Indicators, 96, 368–382. 061 Hébert, M.-P., Beisner, B. E., & Maranger, R. (2016). A compilation of quantitative functional traits for marine and freshwater crustacean zooplankton. Ecology. https://doi.org/10.1890/15-1275

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Dataset · Consensus signal: Dataset
Teacher disagreement score0.055
Threshold uncertainty score0.110

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.003
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0050.010
Science and technology studies0.0020.000
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0200.007

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.221
Teacher spread0.190 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreDataset

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2021
Admission routes2
Has abstractyes

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