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Large scoping reviews: managing volume and potential chaos in a pool of evidence sources

2024· article· en· W4394620875 on OpenAlexaff
Lyndsay Alexander, Kay Cooper, Micah D.J. Peters, Andrea C. Tricco, Hanan Khalil, Catrin Evans, Zachary Munn, Dawid Pieper, Christina Godfrey, Patricia McInerney, Danielle Pollock

Bibliographic record

VenueJournal of Clinical Epidemiology · 2024
Typearticle
Languageen
FieldHealth Professions
TopicHealth Sciences Research and Education
Canadian institutionsQueen's UniversityPublic Health OntarioUniversity of TorontoSt. Michael's Hospital
FundersNational Health and Medical Research Council
KeywordsCHAOS (operating system)Data scienceManagement scienceComputer scienceEngineering

Abstract

fetched live from OpenAlex

Scoping reviews can identify a large number of evidence sources. This commentary describes and provides guidance on planning, conducting, and reporting large scoping reviews. This guidance is informed by experts in scoping review methodology, including JBI (formerly Joanna Briggs Institute) Scoping Review Methodology group members, who have also conducted and reported large scoping reviews. We propose a working definition for large scoping reviews that includes approximately 100 sources of evidence but must also consider the volume of data to be extracted, the complexity of the analyses, and purpose. We pose 6 core questions for scoping review authors to consider when planning, developing, conducting, and reporting large scoping reviews. By considering and addressing these questions, scoping review authors might better streamline and manage the conduct and reporting of large scoping reviews from the planning to publishing stage.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.732
metaresearch head score (Gemma)0.893
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: Methods
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.268
Threshold uncertainty score0.331

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.7320.893
Meta-epidemiology (narrow)0.0050.013
Meta-epidemiology (broad)0.0170.010
Bibliometrics0.0760.060
Science and technology studies0.0140.027
Scholarly communication0.0660.072
Open science0.0150.051
Research integrity0.0140.016
Insufficient payload (model declined to judge)0.0120.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.748
GPT teacher head0.706
Teacher spread0.042 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainMethods
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations43
Published2024
Admission routes1
Has abstractyes

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