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Record W4394873115 · doi:10.1177/10668969241234321

The 1000 Mitoses Project: A Consensus-Based International Collaborative Study on Mitotic Figures Classification

2024· article· en· W4394873115 on OpenAlexaff
Sherman Lin, Christopher Tran, Ela Bandari, Tommaso Romagnoli, Yueyang Li, Michael Chu, Abinaya Sundari Amirthakatesan, Adam Dallmann, A. O. Kostiukov, Ángel Panizo, Anjelica Hodgson, Anna Laury, António Polónia, Ashley Stueck, Aswathy Ashok Menon, Aurélien Morini, Birsen Gizem Özamrak, Caroline Cooper, Celestine Trinidad, Christian Eisenlöffel, Dauda E. Suleiman, David Suster, David A. Dorward, Eman Aljufairi, Fiona Maclean, Gulen Gul, Irene Sansano, Irma Elisa Eraña Rojas, Isidro Machado, Ivana Kholová, Jayanthi Karunanithi, Jean‐Baptiste Gibier, Jefree J. Schulte, Joshua Li, Jyoti Kini, Katrina Collins, Laurence A. Galea, Louis Muller, Luca Cima, Luiz M. Nova‐Camacho, Marcus Dabner, Matthew J. Muscara, Matthew G. Hanna, Mehdi Agoumi, Nicholas J. P. Wiebe, N. Oswald, Nusrat Zahra, Olaleke Oluwasegun Folaranmi, Oleksandr Kravtsov, Orhan Semerci, Namrata N. Patil, Preethi Muthusamy Sundar, P. Charles, Priyadarshini Kumaraswamy Rajeswaran, Qi Zhang, Rachael van der Griend, Raghavendra Pillappa, Raul Perret, Raul S. González, Robyn C. Reed, Sachin Patil, Xiaoyin “Sara” Jiang, Sumaira Qayoom, Susan Prendeville, Swikrity Upadhyay Baskota, Thanh-Truc Tran, Thar-Htet San, Tiia-Maria Kukkonen, Timothy J. Kendall, Toros Taşkın, Tristan Rutland, Varsha Manucha, Vincent Cockenpot, Yale Rosen, Yessica P. Rodriguez-Velandia, Zehra Ordulu, Matthew J. Cecchini

Bibliographic record

VenueInternational Journal of Surgical Pathology · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCancer Genomics and Diagnostics
Canadian institutionsUniversity of CalgarySurrey Memorial HospitalDalhousie UniversityUniversity Health NetworkLondon Health Sciences CentreWestern University
FundersNational Cancer InstituteHacettepe ÜniversitesiMedizinischen Hochschule HannoverFeinberg School of MedicineRowan UniversityNorthwestern University
KeywordsMitosisGrading (engineering)Mitotic indexComputer scienceMedicineMedical physicsBiologyGenetics

Abstract

fetched live from OpenAlex

Introduction. The identification of mitotic figures is essential for the diagnosis, grading, and classification of various different tumors. Despite its importance, there is a paucity of literature reporting the consistency in interpreting mitotic figures among pathologists. This study leverages publicly accessible datasets and social media to recruit an international group of pathologists to score an image database of more than 1000 mitotic figures collectively. Materials and Methods. Pathologists were instructed to randomly select a digital slide from The Cancer Genome Atlas (TCGA) datasets and annotate 10-20 mitotic figures within a 2 mm 2 area. The first 1010 submitted mitotic figures were used to create an image dataset, with each figure transformed into an individual tile at 40x magnification. The dataset was redistributed to all pathologists to review and determine whether each tile constituted a mitotic figure. Results. Overall pathologists had a median agreement rate of 80.2% (range 42.0%-95.7%). Individual mitotic figure tiles had a median agreement rate of 87.1% and a fair inter-rater agreement across all tiles (kappa = 0.284). Mitotic figures in prometaphase had lower percentage agreement rates compared to other phases of mitosis. Conclusion. This dataset stands as the largest international consensus study for mitotic figures to date and can be utilized as a training set for future studies. The agreement range reflects a spectrum of criteria that pathologists use to decide what constitutes a mitotic figure, which may have potential implications in tumor diagnostics and clinical management.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.615
Threshold uncertainty score0.340

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.334
Teacher spread0.313 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2024
Admission routes1
Has abstractyes

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