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Abstract 18481: Genetic Polymorphisms Associated with Response to Intraoperative Heparin Anticoagulation and Thrombosis Risk in Pediatric Patients Undergoing Cardiac Surgery

2012· article· en· W4395041221 on OpenAlexaff
Cedric Manlhiot, Seema Mital, Colleen Gruenwald, Leonardo R. Brandão, Ashok Kumar Manickaraj, Christopher A. Caldarone, Jennifer Russell, VB Sivarajan, Steven M. Schwartz, Helen Holtby, Brian W. McCrindle

Bibliographic record

VenueCirculation · 2012
Typearticle
Languageen
FieldMedicine
TopicVenous Thromboembolism Diagnosis and Management
Canadian institutionsHospital for Sick Children
Fundersnot available
KeywordsMedicineThrombosisHeparinCardiac surgerySurgeryAnesthesia

Abstract

fetched live from OpenAlex

Introduction: Thrombosis is an important and widespread post-operative complication of pediatric cardiac surgery. Prophylaxis intraoperative anticoagulation in this context is obtained by using heparin which requires a bond with antithrombin to achieve anticoagulant effect. We sought to identify SNPs associated with blood antithrombin levels, response to heparin and post-operative thrombosis risk in pediatric patients undergoing cardiac surgery with cardiopulmonary bypass (CPB). Methods: A total of 625 cardiac operations with CPB in 383 patients were reviewed. Ninety-six SNPs on 53 genes in the coagulation/fibrinolysis pathways were assayed using the the Illumina GoldenGate custom SNP panel. Genotyping was successful for >99% of SNPs. Regression models adjusted for repeated measures and bootstrap resampling (1,000 samples) were used to offset multiple comparisons bias; SNPs with very low minor allele frequencies were excluded. Results: Average preoperative antithrombin activity was 89±18% (normal 100%, adjusted for age and oxygen saturation) and average response to heparin was 1.0±0.3U/ml/100U/kg (blood heparin concentration achieved per 100U/kg of heparin). Post-operative thrombosis was observed after 86 operations (14%) (within 30 days of surgery, risk-adjusted according to a previously published model of post-operative thrombosis risk). SNPs associated with higher antithrombin levels, lower heparin response and higher postoperative thrombosis are listed in the Table. Conclusions: Polymorphisms in genes in the coagulation and fibrinolytic systems activity were associated with antithrombin levels, response to heparin and risk of post-operative thrombosis. The association of individual SNPs at the laboratory and clinical levels suggest a mechanism for upstream alteration in the coagulation system that is correlated with undesirable clinical outcome and could be the target for genetically tailored clinical interventions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.252
Teacher spread0.233 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2012
Admission routes1
Has abstractyes

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