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Record W4395468620 · doi:10.1016/j.ijregi.2024.100370

Regional variations in antimicrobial susceptibility of community-acquired uropathogenic Escherichia coli in India: Findings of a multicentric study highlighting the importance of local antibiograms

2024· article· en· W4395468620 on OpenAlexaff
Meher Rizvi, Shalini Malhotra, Jyotsna Agarwal, Areena Hoda Siddiqui, Sheela Devi, Aruna Poojary, Bhaskar Thakuria, Isabella Princess, Hiba Sami, Aarti Gupta, Asfia Sultan, Ashish Jitendranath, Balvinder Mohan, Gunjiganur Shankarappa Banashankari, Fatima Khan, Juri Bharat Kalita, Mannu Jain, Narendra Pal Singh, Renu Gur, Sarita Mohapatra, Shaika Farooq, Shashank Purwar, Mohmed Soeb Jankhwala, Vellore Ramanathan Yamunadevi, Ken Masters, Nisha Goyal, Manodeep Sen, Razan Al Zadjali, Sanjay Jaju, R Rugma, Suneeta Meena, Sudip Kumar Dutta, Bradley J. Langford, Kevin A. Brown, K. Dougherty, Reba Kanungo, Zaaima Al Jabri, Sanjeev Singh, Sarman Singh, Neelam Taneja, Keith H. St. John, Raman Sardana, Pawan Kapoor, Amina Al Jardani, Rajeev Soman, Abdullah Balkhair, David M. Livermore

Bibliographic record

VenueIJID Regions · 2024
Typearticle
Languageen
FieldMedicine
TopicUrinary Tract Infections Management
Canadian institutionsPublic Health OntarioUniversity of Toronto
FundersLeonard M. Miller School of MedicineCenters for Disease Control and PreventionSultan Qaboos UniversityUniversity of Miami
KeywordsFosfomycinMedicineNitrofurantoinMeropenemPiperacillinTazobactamAmikacinAntibiotic resistanceAntimicrobial stewardshipEmpiric therapyCephalosporinAntimicrobialAntibioticsInternal medicineMicrobiologyImipenemBiologyPseudomonas aeruginosa

Abstract

fetched live from OpenAlex

Evidence-based prescribing is essential to optimise patient outcomes in cystitis. This requires knowledge of local antibiotic resistance rates. DASH to Protect Antibiotics (https://dashuti.com/) is a multicentric mentorship programme guiding centres in preparing, analysing and disseminating local antibiograms to promote antimicrobial stewardship in community UTI. Here we map the susceptibility profile of Escherichia coli from 22 Indian centres. These centres spanned 10 Indian States and three Union Territories. Antibiograms for urinary E. coli from the outpatient departments were collated. Standardisation was achieved by regional online training; anomalies were resolved via consultation with study experts. Data were collated and analysed. Nationally, fosfomycin, with 94% susceptibility (inter-centre range 83-97%), and nitrofurantoin with 85% susceptibility (61-97%) retained widest activity. Susceptibility rates were lower for co-trimoxazole (49%), fluoroquinolones (31%) and oral cephalosporins (26%). Rates for third- and fourth- generation cephalosporins were 46% and 52%, respectively, with 54% (33-58%) ESBL prevalence. Piperacillin-tazobactam (81%) amikacin (88%), meropenem (88%) retained better activity, but one centre in Delhi recorded only 42% meropenem susceptibility. Susceptibility rates were mostly higher in South, West and Northeast India; centres in the heavily-populated Gangetic plains, across North and Northwest India, had greater resistance. These findings highlight the importance of local antibiograms in guiding appropriate antimicrobial choices. Fosfomycin and nitrofurantoin are the preferred oral empirical choices for uncomplicated E. coli cystitis in India, though elevated resistance in some areas is concerning. Empiric use of fluoroquinolones and third generation cephalosporins is discouraged whereas piperacillin/tazobactam and aminoglycosides remain carbapenem-sparing parenteral agents.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.039
Threshold uncertainty score0.546

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.003
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.294
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2024
Admission routes1
Has abstractyes

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