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Record W4395663053 · doi:10.1101/2024.04.25.24306353

Methodological review to develop a list of bias items for adaptive clinical trials: Protocol and rationale

2024· preprint· en· W4395663053 on OpenAlexaff
Phillip Staibano, Tyler McKechnie, Alex Thabane, Daniel Olteanu, Keean Nanji, Han Zhang, Carole Lunny, Michael Au, Michael K. Gupta, Jesse D. Pasternak, Sameer Parpia, JEM Young, Mohit Bhandari

Bibliographic record

VenuemedRxiv · 2024
Typepreprint
Languageen
FieldEconomics, Econometrics and Finance
TopicHealth Systems, Economic Evaluations, Quality of Life
Canadian institutionsHamilton Health SciencesMcMaster UniversityUniversity Health NetworkUniversity of British ColumbiaImpact
Fundersnot available
KeywordsProtocol (science)Computer scienceClinical trialPsychologyMedicineAlternative medicine

Abstract

fetched live from OpenAlex

ABSTRACT Background Randomized-clinical trials (RCTs) are the gold-standard for comparing health care interventions, but can be limited by early termination, feasibility issues, and prolonged time to trial reporting. In contrast, adaptive clinical trials (ACTs), which are defined by pre-planned modifications and analyses that occur after starting patient recruitment, are gaining popularity as they can streamline trial design and time to reporting. As adaptive methodologies continue to be adopted by researchers, it will be critical to develop a risk-of-bias tool that evaluates the unique methodological features of ACTs so that their quality can be improved and standardized for the future. In our proposed methodological review, we plan to develop a list of risk-of-bias items for ACTs to develop a candidate instrument. Methods and analysis We will perform a systematic database search to capture: (1) ACTs published in any discipline of medicine and/or surgery; and (2) studies that have proposed or reviewed items pertaining to methodological risk, bias, and/or quality in ACTs. We will perform a comprehensive search of citation databases, such as Ovid MEDLINE, EMBASE, CENTRAL, the Cochrane library, and Web of Science, in addition to multiple grey literature sources to capture published and unpublished literature related to ACTs and studies evaluating the methodological quality of ACTs. We will also search methodological registries for any risk of bias tools for ACTs. All screening and review stages will be performed in duplicate with a third senior author serving as arbitrator for any discrepancies. Included ACTs will be analyzed in a descriptive manner, and we will perform regression analysis to identify factors associated with poor reporting quality and high risk of bias. We will also perform a risk of bias assessment of ACTs using the Cochrane risk-of-bias 2.0 tool and we will assess reporting quality using the CONSORT-ACE tool. These assessments will be performed independently and in duplicate. This will be done to help generate risk of bias concepts, themes, and items that can be included in the candidate tool. For all studies of methodological quality and risk of bias, we will extract all pertinent bias items and/or tools. We will combine conceptually similar items in a descriptive manner and classify them as referring to bias or to other aspects of methodological quality, such as reporting. We will plan to generate pertinent risk of bias items and fields and finally, a candidate tool that will undergo further refinement, testing, and validation in future development stages. Ethics and dissemination This review does not require ethics approval as human subjects are not involved. As mentioned previously, this study is the first step in developing a tool to evaluate the risk of bias and methodological quality of ACTs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmaMetaresearch
Domain: Methods · Genre: Protocol
About the Canadian research system: no · About a Canadian topic: no
Theoretical or conceptualmedium
gptMetaresearch
Domain: Methods · Genre: Protocol
About the Canadian research system: no · About a Canadian topic: no
Systematic reviewmedium
models splitAgreement compares identical category sets and study designs across arms.

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.398
metaresearch head score (Gemma)0.607
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: Systematic review
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.602
Threshold uncertainty score0.742

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.3980.607
Meta-epidemiology (narrow)0.0080.008
Meta-epidemiology (broad)0.0160.029
Bibliometrics0.0250.024
Science and technology studies0.0060.009
Scholarly communication0.0110.011
Open science0.0100.011
Research integrity0.0160.015
Insufficient payload (model declined to judge)0.0590.022

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.965
GPT teacher head0.680
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Labeled directly by 2 models reading the full record.

Metaresearch

The models disagree on parts of this classification; every voice is preserved in the section at the end of the page.

Study designTheoretical or conceptual · Systematic review
DomainMethods
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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