Panx1 Ablation Aggravates Oxidative Stress and Cell Death by Altering AMPK/mTOR signaling Pathways and the Composition of Synapses in the Zebrafish
Bibliographic record
Abstract
Abstract Pannexin-1 channels have garnered attention for their implications in neurodevelopment, potentially having a dual role in mediating a delicate balance between cell death and survival. However, a comprehensive understanding of the underlying molecular and cellular mechanisms and Panx1’s potential protective functions throughout neurodevelopment remains to be determined. Zebrafish larvae with loss of Pannexin-1a function were subjected to an acute exposure to 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP). Early-life changes in larvae induced by uncoupling of oxidative phosphorylation were investigated by a computational Gene Set Expression Analysis of RNA-seq data and experimental testing of light-stimulated locomotor behavior, cell death, and bioelectrical properties of local field potentials in the ascending visual pathway. A KEGG pathway analysis underscored Panx1a’s regulatory influence on neurodevelopment. Targeting Panx1a caused a deregulation of oxidative phosphorylation, glycolysis, reactive oxygen production, hypoxia, unfolded protein response pathways, and reduced extracellular ATP. Further, Panx1a ablation enhanced the transcriptional activation of 5’ AMP-activated protein kinase (AMPK) kinase, a cellular energy sensor activated by falling energy status, largely to activate glucose and fatty acid uptake and oxidation when cellular energy is low. The activation of the AMPK pathway in Panx1a knock-out larvae correlated with the stimulation of the mammalian target of rapamycin (mTORC1) pathway that controls cellular metabolism, catabolism, immune responses, autophagy, survival, proliferation, and migration, to maintain cellular homeostasis. The differential expression of mTORC1 pathway genes associated with autophagy, and apoptosis signaling pathways. The resultant cell death was pronounced in the pallium and tectum regions. The loss of cells interrelated with a trans-synaptic a loss of synaptic neurotransmitter receptor and ion channel/transporter expression. Local field potential recordings in the optic tectum and pallium demonstrated that Panx1a’s involvement in modulating local neuronal networks was altered. Collectively, the results shed light on the impacts of acute MPTP treatment on locomotor behavior, transcriptomic shifts, metabolic disturbances, and the pivotal role of Panx1a in cell death. These insights enhance our comprehension of the intricate molecular and cellular mechanisms underpinning neurodevelopment, with implications for potential therapeutic strategies targeting Panx1 channels in autism and Alzheimer’s disease. Graphical Abstract Highlights A genetic model was combined with the neurotoxin MPTP to explore the roles of zebrafish Pannexin-1 channels in neurodevelopment under oxidative stress conditions. A potential beneficial impact of targeting Panx1a is superseded by synaptic plasticity loss, dysfunctional mitochondrial metabolism, and cell death pathway activation. Loss of Panx1a amplifies AMPK/mTORC1 pathway activation of cell death pathways. A role of Panx1a as a regulator of energy and synaptic homeostasis was identified.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.000 | 0.000 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".