MétaCan
Menu
Back to cohort
Record W4396229864 · doi:10.1242/dev.202900

Correction: Zebrafish <i>raptor</i> mutation inhibits the activity of mTORC1, inducing craniofacial defects due to autophagy-induced neural crest cell death

2024· erratum· en· W4396229864 on OpenAlexaboutno aff
Scott K. Tucker, Ritika Ghosal, Mary E. Swartz, Stephanie Zhang, Johann K. Eberhart

Bibliographic record

VenueDevelopment · 2024
Typeerratum
Languageen
FieldMedicine
TopicAutophagy in Disease and Therapy
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyNeural crestZebrafishAutophagymTORC1CraniofacialMutationCell biologyProgrammed cell deathEvolutionary biologyZoologyGeneticsGeneEmbryoApoptosisPhosphorylation

Abstract

fetched live from OpenAlex

There were errors in Development (2024) 151, dev202216 (doi:10.1242/dev.202216).The incorrect spelling of author name Ritika Ghosal was used. The correct author list appears above.The title and first part of the legend for Fig. 7 were incorrect. The corrected and original titles and legends are shown below:Corrected:Fig. 7. Chemical inhibition of apoptosis partially rescues the Meckel's cartilage defect. (A) Length of Meckel's cartilage in untreated wild type, untreated mutants and 25 µM caspase-treated mutants. Each point represents one side of the lower jaw (Meckel's cartilage). The statistical analyses were conducted using one-way ANOVA followed by Tukey's honest significant difference (HSD) post-hoc test for multiple comparisons, *P<0.05, ****P<0.0001. (B-D) Ventral views of 4 dpf fish, anterior is towards the left. The top and bottom of each box correspond to the third quartile (Q3) and first quartile (Q1), respectively. Each box covers the interquartile range (IQR), where 50% of the data lies. The median is depicted by the horizontal line within each box. The upper whisker extends to the largest value within Q3 + 1.5 * IQR. The lower whisker extends to the smallest value within Q1 - 1.5 * IQR. Any data point outside these whiskers is classified as an outlier. See Mcgill et al. (1978).Original:Fig. 7. Chemical inhibition of autophagy via caspase inhibitor partially rescues the Meckel's cartilage size defect. (A) Graph of linear measurements of Meckel's cartilage length. Each point is one anterior or posterior cartilage, two cartilages per fish. The statistical analyses were conducted using one-way ANOVA followed by Tukey's honest significant difference (HSD) post-hoc test for multiple comparisons, *P<0.05, ****P<0.0001. (B-D) Ventral views of 4 dpf fish, anterior is towards the left. The top and bottom of each box correspond to the third quartile (Q3) and first quartile (Q1), respectively. Each box covers the interquartile range (IQR), where 50% of the data lies. The median is depicted by the horizontal line within each box. The upper whisker extends to the largest value within Q3 + 1.5 * IQR. The lower whisker extends to the smallest value within Q1 - 1.5 * IQR. Any data point outside these whiskers is classified as an outlier. See Mcgill et al. (1978).The legend for Fig. S1 incorrectly stated that z-sections were shown instead of z-projections. The correct legend is shown below:Fig. S1. Fluorescent in-situ hybridization of raptor at 48 hpf. (A-C) Confocal images of double-labeling experiment utilizing wild-type fli1:EGFP fish at 48 hpf, stained with fluorescent in-situ for raptor in red. z-projections are shown, anterior is to the left. Representative images of (A) double-labeled whole body, (B) double-labeled head, and (C) raptor fluorescent in-situ head.The legend for Fig. S4 incorrectly stated that qPCR was shown instead of RT-PCR. The correct legend is shown below:Fig. S4. mTOR pathway genes are maternally provided. RT-PCR of cDNA collected from 2-cell zebrafish embryos.The legend for Fig. S6 was inadvertently repeated for Fig. S7. The correct legend is shown below:Fig. S7. Wild-type and raptor mutants have similar expression patterns of dlx2a, barx1 and nkx3.2. (A-A’’’) Wild-type and (B-B’’’) raptor mutant fish at 30 hpf. Fluorescent in-situ hybridization showing (A,B) merged, (A’,B’)dlx2a(A’’,B’’)barx1 and (A’’’,B’’’)nkx3.2 expression.The authors apologise to the readers for these errors and any inconvenience they may have caused.The online full-text and PDF versions of the paper have been corrected.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.013
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.071
Threshold uncertainty score0.239

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.013
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0020.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0030.005
Insufficient payload (model declined to judge)0.0710.024

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.270
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

Explore more

Same venueDevelopmentSame topicAutophagy in Disease and TherapyFrench-language works237,207