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Record W4396696421 · doi:10.1038/s41564-024-01656-3

MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data

2024· letter· en· W4396696421 on OpenAlexaff
Kang Soo Lee, Zachary Landry, Awais Athar, Uria Alcolombri, Pratchaya Pramoj Na Ayutthaya, David Berry, Philippe de Bettignies, Ji‐Xin Cheng, Gábor Csúcs, Cui Li, Volker Deckert, Thomas Dieing, Jennifer A. Dionne, Ondrej Doskocil, Glen G D’Souza, Cristina García‐Timermans, Notburga Gierlinger, Keisuke Goda, Roland Hatzenpichler, Richard J. Henshaw, Wei E. Huang, Ievgeniia Iermak, Natalia P. Ivleva, Janina Kneipp, Patrick Kubryk, Kirsten Küsel, Tae Kwon Lee, Sung Sik Lee, Bo Ma, Clara Martínez‐Pérez, Pavel Matousek, Rainer U. Meckenstock, Wei Min, Peter Mojzeš, Oliver Müller, Naresh Kumar, Per Halkjær Nielsen, Ioan Notingher, Márton Palatinszky, Fátima C. Pereira, Giuseppe Pezzotti, Zdeněk Pilát, Filip Plesinger, Jürgen Popp, Alexander J. Probst, Alessandra Riva, Amr A. E. Saleh, Ota Samek, H. M. Sapers, Olga T. Schubert, Astrid KM Stubbusch, Loza F. Tadesse, Gordon T. Taylor, Michael Wagner, Jing Wang, Huabing Yin, Yue Yang, Renato Zenobi, Jacopo Zini, Uğis Sarkans, Roman Stocker

Bibliographic record

VenueNature Microbiology · 2024
Typeletter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSpectroscopy Techniques in Biomedical and Chemical Research
Canadian institutionsYork University
FundersEuropean Molecular Biology LaboratoryGordon and Betty Moore FoundationSimons Foundation
KeywordsRaman spectroscopyWorld Wide WebSpectroscopyOpen sourceComputer scienceChemistryPhysicsOpticsAstronomy

Abstract

fetched live from OpenAlex
No abstract in any covered source. Its absence is recorded, not treated as a negative.

No abstract. This is not a gap in this database; OpenAlex has none either. 23.3% of the frame is in this state, and the screen finds HALF as much metaresearch here, so the absence is a measured bias rather than a missing field.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Open science, Research integrity
Consensus categoriesOpen science, Research integrity
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Commentary · Consensus signal: Commentary
Teacher disagreement score0.184
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0150.012
Research integrity0.0100.006
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.430
Teacher spread0.387 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreCommentary

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2024
Admission routes1
Has abstractno

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