MétaCan
Menu
Back to cohort
Record W4396701920 · doi:10.1016/j.seares.2024.102503

Examining effects of sample concentration on estimates of live phytoplankton abundance

2024· article· en· W4396701920 on OpenAlexafffund
Sean Yardley, Dawson Ogilvie, Oscar Casas‐Monroy, Jocelyn Kydd, R. Rozon, Sarah A. Bailey

Bibliographic record

VenueJournal of Sea Research · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicMarine Ecology and Invasive Species
Canadian institutionsFisheries and Oceans Canada
FundersFisheries and Oceans CanadaTransport Canada
KeywordsPhytoplanktonAbundance (ecology)Environmental scienceSample (material)OceanographyBiologyEcologyChemistryNutrientGeology

Abstract

fetched live from OpenAlex

With the entry into force of the International Maritime Organization's International Ballast Water Management Convention in September 2017, ships have begun to install and operate onboard ballast water management systems (BWMS) to reduce the number of live organisms in ballast water. Scientific methods were developed to assess the effectiveness of BWMS at reducing the number of live organisms in ballast water. However, detecting low organism concentrations in treated ballast water is challenging when considering the small sample volume (6 mL) analyzed for organisms in the 10–50 μm size class. The volume analyzed can be increased by concentrating the sample prior to analysis, but it is important to assess the effects of the sample concentration method due to potential cell loss experienced during the concentration step. Therefore, laboratory experiments were conducted to assess the effects of a gravity filtration method to concentrate samples to a factor of 40:1. Experiments were conducted for both low and high organism abundances. For unpreserved samples at low organism abundances (~10 cells mL−1), concentrated samples had on average 31% fewer live cells mL−1 than unconcentrated samples for four out of five experiments. At high organism abundances (≥ 120 cells mL−1), unpreserved concentrated samples had on average 55% fewer live cells than unconcentrated samples. Alternatively, with preserved samples at low organism abundances, concentrated samples had on average 4.5× more cells than unconcentrated samples. At high organism abundances, concentrated samples had on average 6.4× more cells than unconcentrated samples. Differences were also observed between preserved and unpreserved samples. These findings can help to improve ballast water monitoring procedures and BWMS assessments, addressing a critical challenge to maritime environmental protection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.233
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.052
GPT teacher head0.337
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Sea ResearchSame topicMarine Ecology and Invasive SpeciesFrench-language works237,207