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Record W4396709230 · doi:10.1063/5.0202240

<tt>Grid</tt>: A Python library for molecular integration, interpolation, differentiation, and more

2024· article· en· W4396709230 on OpenAlexafffund
Alireza Tehrani, Xiaotian Derrick Yang, Marco Martínez González, Leila Pujal, Raymundo Hernández‐Esparza, Matthew Chan, Esteban Vöhringer‐Martinez, Toon Verstraelen, Paul W. Ayers, Farnaz Heidar‐Zadeh

Bibliographic record

VenueThe Journal of Chemical Physics · 2024
Typearticle
Languageen
FieldPhysics and Astronomy
TopicAdvanced Chemical Physics Studies
Canadian institutionsMcMaster UniversityQueen's University
FundersFondo Nacional de Desarrollo Científico y TecnológicoComisión Nacional de Investigación Científica y TecnológicaVlaams Supercomputer CentrumFonds Wetenschappelijk OnderzoekBijzonder Onderzoeksfonds UGentQueen's UniversityCanada Research ChairsNatural Sciences and Engineering Research Council of CanadaVlaamse regeringUniversiteit GentEuropean CommissionMax-Planck-GesellschaftCompute CanadaCanarie
KeywordsPython (programming language)GridComputer scienceDocumentationLeverage (statistics)Software engineeringComputational scienceDistributed computingProgramming languageMathematicsArtificial intelligence

Abstract

fetched live from OpenAlex

Grid is a free and open-source Python library for constructing numerical grids to integrate, interpolate, and differentiate functions (e.g., molecular properties), with a strong emphasis on facilitating these operations in computational chemistry and conceptual density functional theory. Although designed, maintained, and released as a stand-alone Python library, Grid was originally developed for molecular integration, interpolation, and solving the Poisson equation in the HORTON and ChemTools packages. Grid is designed to be easy to use, extend, and maintain; this is why we use Python and adopt many principles of modern software development, including comprehensive documentation, extensive testing, continuous integration/delivery protocols, and package management. We leverage popular scientific packages, such as NumPy and SciPy, to ensure high efficiency and optimized performance in grid development. This article is the official release note of the Grid library showcasing its unique functionality and scope.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.005
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Software · Consensus signal: Software
Teacher disagreement score0.100
Threshold uncertainty score0.335

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.005
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.002
Science and technology studies0.0020.001
Scholarly communication0.0030.005
Open science0.0040.004
Research integrity0.0010.005
Insufficient payload (model declined to judge)0.1000.082

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.249
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreSoftware

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2024
Admission routes2
Has abstractyes

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