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Record W4397044622 · doi:10.1681/asn.20233411s1769d

Assessment of Extracellular Vesicles Isolated from the Culture Medium of Ischemic Renal Proximal Tubular Epithelial Cells

2023· article· en· W4397044622 on OpenAlexaff
Raquel Silva Neres-Santos, Marcela Sorelli Carneiro‐Ramos, Dylan Burger

Bibliographic record

VenueJournal of the American Society of Nephrology · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicExtracellular vesicles in disease
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsExtracellular vesiclesVesicleExtracellularChemistryCell biologyPathologyMedicineBiologyBiochemistryMembrane

Abstract

fetched live from OpenAlex

Background: Extracellular vesicles (EVs) are membranous particles released by a cell into the extracellular environment. They play an emerging and important role in cell communication and have been implicated in a variety of pathological conditions including acute kidney injury and chronic kidney diseases. Our objective was to characterize the dynamics of extracellular vesicle release by proximal tubular epithelial cells exposed to hypoxia and reoxygenation (H/R). Methods: Primary human renal proximal tubule epithelial cells (hPTECs, n=3) were exposed to 24 hours of 1% hypoxia followed by 3 hours of reoxygenation. Proximal tubule phenotype was verified by megalin immunofluorescence and EVs were isolated from the conditioned culture medium by ultracentrifugation (100.000g for 1h30min). Extracellular vesicle size and quantity were assessed by nanoparticle tracking analysis (NTA) and EV protein quantification. Results: The immunofluorescence analysis indicated hPTECs were megalin-positive and this was not altered by H/R. NTA indicated that the H/R exposed cells released ˜2-fold more EVs than normoxia (p<0.05). This was further supported by an increase in EV protein in conditioned media of H/R vs normoxia (1.08±0.17 vs 0.75±0.12 μg/μl, p<0.05). The mean particle sizes were not significantly different between H/R (153.5nm) and normoxia (145.8nm) groups. Conclusions: Our initial data suggest that under hypoxia induces a shift in EV release from proximal tubule cells with greater EV release. These findings suggest that proximal tubule EV release may be altered in the context of ischemic kidney disease. Such changes may contribute to disease pathogenesis. Funding: Government Support - Non-U.S.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.261
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

Same venueJournal of the American Society of NephrologySame topicExtracellular vesicles in diseaseFrench-language works237,207