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Record W4397044727 · doi:10.1681/asn.20233411s1204a

Correction of PKD by Gene Transfer into Pkd1-Null Mouse Model

2023· article· en· W4397044727 on OpenAlexaff
Marie Trudel, Almira Kurbegovic

Bibliographic record

VenueJournal of the American Society of Nephrology · 2023
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsMontreal Clinical Research Institute
Fundersnot available
KeywordsPKD1Gene transferGeneBiologyEndocrinologyInternal medicineGeneticsMedicinePolycystic kidney diseaseKidney

Abstract

fetched live from OpenAlex

Background: Autosomal dominant polycystic kidney disease(ADPKD) causes renal cysts and insufficiency due mainly to PKD1 mutations. Since microscopic cysts in ADPKD kidneys are likely formed in utero, we re-expressed wild-type Pkd1/Pc1 protein in Pkd1-/- mouse via germ line by series of complementary gene transfer to assess for longterm cure of severe cystogenesis and neonatal death. Methods: Pc1 re-expression in the most severe mouse model Pkd1-/- was assessed by 3 strategies using genomic Pkd1 under its own regulatory elements (Pkd1wt), driven by kidney specific regulatory elements (900nt SB, SBPkd1) or Pkd1Minigene. Renal molecular (qPCR, IB), tubular (stainings, IF, RNAscope) and functional (BUN, hct) analyses were performed. Results: Pkd1-/- mice targeted with 2 distinct Pkd1wt gene transfers, of ˜8-fold overexpression and intense RNAscope signal over all tubular segments and glomeruli similarly to endogenous cell profile, fully rescued PKD phenotype. SBPkd1 one- and highcopy gene transfers conveyed 0.6- or 7-fold Pkd1 endogenous levels respectively. Onecopy SBPkd1 transfer initiates cysts after birth ˜P3 and confer sufficient Pkd1 expression during maturation to correct proximal tubules and glomeruli, to minimize distal cyst and to postpone but not prevent cyst in collecting ducts. This transfer extended Pkd1-/- life survival by 4-fold. High-copy SBPkd1 transfer provide proper targeting and expression levels for complete rescue during renal maturation, and significantly retard cyst in proximal and collecting tubules at post-maturation but is insufficient to prevent distal cysts. This transfer increased lifespan by 25-fold. SBPkd1 transfers show that collecting tubules require higher Pkd1 expression during maturation and that SB regulatory elements appreciably overlap with those of the endogenous promoter. High-copy renal Pkd1Mini transfer resulted in similar expression to endogenous Pkd1 with widespread and homogeneous weak Pkd1 cellular signal, partially rescuing glomeruli and all cystic tubular segments during maturation and attained therapeutic levels with increased lifespan by 4-fold. Conclusions: Our study determined that Pkd1 intragenic sequences not only control levels of expression but alike the upstream sequences, also regulate spatio-temporal expression pattern. One-copy SBPkd1 is sufficient to substantially delay cystogenesis. Pc1 re-expression can considerably extend lifespan or eliminate PKD. Funding: Government Support - Non-U.S.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.019

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0060.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.266
Teacher spread0.250 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

Explore more

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