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Specific deletion of FHA domain containing SLMAP isoform in mice impacts embryonic development without affecting Hippo signaling. AP Dias, T Rehmani, M Salih BS Tuana

2024· article· en· W4398166635 on OpenAlexaff
Ana Dias, Taha Rehmani, Maysoon Salih, Balwant S. Tuana

Bibliographic record

VenuePhysiology · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicHippo pathway signaling and YAP/TAZ
Canadian institutionsUniversity of Ottawa
Fundersnot available
KeywordsGene isoformEmbryonic stem cellCell biologyEmbryogenesisBiologyHippo signaling pathwaySignal transductionEmbryoGeneticsGene

Abstract

fetched live from OpenAlex

The tail-anchored membrane protein SLMAP3 has been proposed to negatively regulate Hippo signaling and impact cell proliferation. Proteomics have defined SLMAP in complex with STRIPAK a multiprotein interactome consisting of Germinal center kinases and PP2A phosphatase. Data also suggests that the N-terminal FHA domain of SLMAP3 can bind Hippo kinase (MST 1/2) while it‘s coiled-coil regions can integrate PP2A phosphatase to modulate the downstream phosphorylation of YAP/TAZ for cytoplasmic retention. Nuclear YAP/TAZ serve as coactivators of TEAD mediated transcription of genes involved in cell proliferation and organogenesis. The physiological importance of SLMAP3 and it‘s in vivo function in regulating Hippo and organ development remains to be determined. We report that mice with specific deletion of SLMAP3 isoform were embryonic lethal where most organs including muscle, brain, spinal cord, kidney, lungs, intestines, cartilage and bone exhibited severe developmental deficits. The SLMAP3 deficient embryos were ~30% smaller (p<0.05) with small organs compared to wild types. The analysis of Hippo components MST1/2 and YAP/TAZ indicated no changes in their phosphorylation status in embryos or tissue such as muscle and the neural tube due to the loss of SLMAP3. RNA-Seq of whole embryos showed no significant changes to downstream targets of Hippo signaling in SLMAP3-KO. In addition, SLMAP3 loss had no obvious effect on cell proliferation assessed with Ki-67/pH3 staining in embryogenesis. Mouse primary embryonic fibroblasts (MEFs) isolated from embryos deficient in SLMAP3 had no changes in YAP and MST1/2 phosphorylation or proliferation while RNA-seq analysis indicated no changes in TEAD regulated gene activity. Further, phospho-proteomics of MEF lysates revealed no changes in Hippo signaling in SLMAP3 loss, nor in pathways associated with cell proliferation or death. Similarly, knockout of SLMAP3 in myoblast displayed no changes in Hippo signaling or proliferation capacity. These data indicate that SLMAP3 is critically important for embryonic development through unique mechanisms and do not implicate the involvement of Hippo signaling. Supported by CIHR. This is the full abstract presented at the American Physiology Summit 2024 meeting and is only available in HTML format. There are no additional versions or additional content available for this abstract. Physiology was not involved in the peer review process.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.255
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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