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Record W4398176660 · doi:10.1101/2024.05.17.594196

Indirect genetic effects increase the heritable variation available to selection and are largest for behaviours: a meta-analysis

2024· preprint· en· W4398176660 on OpenAlexaff
Francesca Santostefano, María Moirón, Alfredo Sánchez‐Tójar, David N. Fisher

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic and phenotypic traits in livestock
Canadian institutionsUniversité du Québec à Montréal
Fundersnot available
KeywordsVariation (astronomy)Meta-analysisSelection (genetic algorithm)Genetic variationEvolutionary biologyBiologyPsychologyGeneticsStatisticsComputer scienceMathematicsMedicineArtificial intelligenceInternal medicineGene

Abstract

fetched live from OpenAlex

Abstract The evolutionary potential of traits is governed by the amount of heritable variation available to selection. While this is typically quantified based on genetic variation in a focal individual for its own traits (direct genetic effects, DGEs), when social interactions occur, genetic variation in interacting partners can influence a focal individual’s traits (indirect genetic effects, IGEs). Theory and studies on domesticated species have suggested IGEs can greatly impact evolutionary trajectories, but whether this is true more broadly remains unclear. Here we perform a systematic review and meta-analysis to quantify the amount of trait variance explained by IGEs and the contribution of IGEs to predictions of adaptive potential. We identified 180 effect sizes from 47 studies across 21 species and found that, on average, IGEs of a single social partner account for a small but statistically significant amount of phenotypic variation (0.03). As IGEs affect the trait values of each interacting group member and due to a typically positive – although statistically nonsignificant – correlation with DGEs ( r DGE-IGE = 0.26), IGEs ultimately increase trait heritability substantially from 0.27 (narrow-sense heritability) to 0.45 (total heritable variance). This 66% average increase in heritability suggests IGEs can increase the amount of genetic variation available to selection. Furthermore, whilst showing considerable variation across studies, IGEs were most prominent for behaviours, and to a lesser extent for reproduction and survival, in contrast to morphological, metabolic, physiological, and development traits. Our meta-analysis therefore shows that IGEs tend to enhance the evolutionary potential of traits, especially for those tightly related to interactions with other individuals such as behaviour and reproduction. Lay Summary Predicting evolutionary change is important for breeding better livestock and crops, for understanding how biodiversity arises and how populations respond to environmental change. Normally, these predictions are based on how the genetic variants in an organism influence its own traits (characteristics). However, when organisms socially interact, for instance by fighting or cooperating, then the genes in one individual can influence the traits of others, therefore affecting the potential for evolutionary change. We compared 47 studies across 21 animal species and found that the effect of the genes of a single social partner is small but statistically significant, while the total contribution of social genetic effects to evolutionary potential is large. These effects are particularly important for the evolution of animals’ behaviours and reproductive traits, but less so for other traits such as body size and physiology. We also found that, because an individual can interact with many others and influence them all, social interactions can substantially increase the potential for a population to evolve from generation to generation. Our results show how social interactions can potentially alter the evolution of those traits known to respond to social interactions in comparison to standard expectations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.033
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: Meta-analysis
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.013
Threshold uncertainty score0.068

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.033
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0070.036
Bibliometrics0.0060.007
Science and technology studies0.0010.001
Scholarly communication0.0040.002
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0050.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.229
Teacher spread0.212 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designMeta-analysis
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2024
Admission routes1
Has abstractyes

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