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Mechanisms and Site Selectivity of (Het)Ar–X Oxidative Addition to Pd(0) Are Controlled by Frontier Molecular Orbital Symmetry

2024· preprint· en· W4399087936 on OpenAlexafffund
Jingru Lu, Nathan D. Schley, Irina Paci, David C. Leitch

Bibliographic record

VenueChemRxiv · 2024
Typepreprint
Languageen
FieldChemistry
TopicCatalytic C–H Functionalization Methods
Canadian institutionsUniversity of Victoria
FundersNatural Sciences and Engineering Research Council of CanadaResearch Corporation for Science Advancement
KeywordsHOMO/LUMOChemistryAntibonding molecular orbitalMolecular orbitalNucleophileSelectivityComputational chemistryStereochemistryPhotochemistryPhysicsMoleculeAtomic orbitalOrganic chemistryElectronCatalysis

Abstract

fetched live from OpenAlex

We report how the reaction mechanism and site-selectivity of 2-halopyridine oxidative addition to L2Pd(0) are both controlled by frontier molecular orbital symmetry. Comparing oxidative addition rates for pairs of 2-chloro-3-EDG-pyridines / 2-chloro-5-EDG-pyridines (EDG = electron-donating group: NH2, OMe and F) to Pd(PCy3)2 reveals the 3-EDG isomers undergo oxidative addition ~100 times faster than their 5-EDG counterparts (∆ΔG‡OA = 10.4-11.6 kJ mol-1). Experimental and computational mechanistic studies reveal that the LUMO symmetries of the substrates control the oxidative addition mechanism. For the 3-EDG derivatives, high LUMO orbital coefficients at the reactive C2 position, and antibonding LUMO symmetry through the C2=N bond of the pyridine lead to a nucleophilic displacement oxida-tive addition mechanism. Conversely, the LUMO of the 5-EDG derivatives has a node through the C5–C2 plane, lead-ing to minimal orbital contribution at the reactive carbon. The higher energy LUMO+1 has substantial density at C2, but minimal orbital density at the nitrogen. This leads to 5-EDG substrates undergoing a 3-centered insertion oxida-tive addition mechanism. These orbital symmetry effects also control site-selectivity for multihalogenated pyridines, which we investigate for both electron-donating and electron-withdrawing substituents. Incorporating simple fron-tier orbital based molecular descriptors to a quantitative multivariate linear model for oxidative addition leads to im-proved prediction accuracy for both relative rates and site-selectivity of substituted 2-halopyridine oxidative addition to L2Pd(0).

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How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.157
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.255
Teacher spread0.246 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2024
Admission routes2
Has abstractyes

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