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Record W4399446734 · doi:10.1101/2024.06.04.597447

Data rescue in high-motion youth cohorts for robust and reproducible brain-behavior relationships

2024· preprint· en· W4399446734 on OpenAlexaff
Jivesh Ramduny, Tamara Vanderwal, Clare Kelly

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2024
Typepreprint
Languageen
FieldNeuroscience
TopicFunctional Brain Connectivity Studies
Canadian institutionsBC Children's HospitalUniversity of British Columbia
Fundersnot available
KeywordsMotion (physics)ConnectomeComputer scienceSample (material)Identification (biology)Displacement (psychology)Artificial intelligenceFunctional connectivityPsychologyNeuroscience

Abstract

fetched live from OpenAlex

Abstract Recognition of the detrimental impact of participant motion on functional connectivity measures has led to the adoption of increasingly stringent quality control standards to minimize potential motion artifacts. These stringent standards can lead to the exclusion of many participants, creating a tension with a countervailing requirement for large sample sizes that can provide adequate statistical power, particularly for brain-behavior association studies. Here, we test and validate two techniques aimed at mitigating the impact of head motion on functional connectivity estimates, and show that these techniques enable the retention of a substantial proportion of participants who would otherwise be excluded based on motion criteria, such as a minimum mean framewise displacement (FD) threshold. Specifically, we first show that functional connectomes computed using time series data that have been ordered according to motion (i.e., framewise displacement — FD) and (1) subsetted to include the lowest-motion time points (“ motion ordered ”) or (2) subsetted and resampled (“ bagged ”) are reproducible, in that they enable the successful identification of an individual from a group using functional connectome fingerprinting. Second, we demonstrate that motion-ordered and bagged functional connectomes yield robust brain-behavior associations, which, when examined as a function of sample size, are comparable to those obtained using the standard full time series. Finally, we show that the utility of both approaches lies in maximizing participant inclusivity by allowing for the retention of high-motion participants that would otherwise be discarded. Given equivalent performance of the two approaches across these tests of reproducibility, validity, and utility, we conclude by recommending motion-ordering to enable data rescue, maximize inclusivity, and address the need for adequately powered samples in functional connectivity research, while maintaining stringent data quality standards. While our findings were reproducible across different head motion thresholds and edges in the functional connectome, we outline possibilities for further validation and assessment of generalization using other behavioral phenotypes and consortia datasets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.013
metaresearch head score (Gemma)0.035
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.987
Threshold uncertainty score0.070

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0130.035
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0020.001
Scholarly communication0.0010.001
Open science0.0010.002
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.116
GPT teacher head0.275
Teacher spread0.159 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designBench or experimental
DomainReproducibility
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2024
Admission routes1
Has abstractyes

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