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Record W4399567599 · doi:10.1021/acs.estlett.4c00342

Biotransformation of 6PPD-quinone <i>In Vitro</i> Using RTL-W1 Cell Line

2024· article· en· W4399567599 on OpenAlexafffund
Phillip Ankley, Francisco Carlos da Silva, David Montgomery, Matthew Schultz, Ed S. Krol, Markus Hecker, Markus Brinkmann

Bibliographic record

VenueEnvironmental Science & Technology Letters · 2024
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicATP Synthase and ATPases Research
Canadian institutionsGlobal Institute for Water SecurityUniversity of Saskatchewan
FundersFisheries and Oceans CanadaNatural Sciences and Engineering Research Council of CanadaGlobal Water FuturesUniversity of Saskatchewan
KeywordsBiotransformationQuinoneIn vitroChemistryCell cultureStereochemistryCombinatorial chemistryBiologyBiochemistryGenetics

Abstract

fetched live from OpenAlex

Urban stormwater runoff contains the tire-derived transformation product N -(1,3-dimethylbutyl)- N ′-phenyl- p -phenylenediamine-quinone (6PPD-quinone), which poses significant environmental risks due to its high toxicity toward certain salmonids. 6PPD-quinone biotransformation has been investigated to explain some of the stark interspecies differences in sensitivity across different fishes; however, the primary mechanisms of 6PPD-quinone biotransformation remain unclear. This work aimed to explore the toxicokinetics of 6PPD-quinone in immortalized rainbow trout ( Oncorhynchus mykiss ) liver cells (RTL-W1) to identify transformation products, using coexposure with different enzyme inhibitors and inducers. Using high-resolution mass spectrometry, we identified three phase I 6PPD-quinone transformation products, with phenyl ring hydroxylation dominating, followed by hydroxylation of the alkyl side chain, and an unknown transformation product after 4 h of exposure. Co-exposing RTL-W1 cells with α-naphthoflavone and quercetin greatly inhibited the biotransformation of 6PPD-quinone, revealing that CYP1A is primarily involved in phase I biotransformation. Hepatic clearance predicted from in vitro results was further verified based on isolated perfused trout liver experiments. Further studies are necessary on the biotransformation and kinetics of 6PPD-quinone and the detoxification pathways involved in a wide phylogenetic space in fishes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.248
Teacher spread0.241 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations23
Published2024
Admission routes2
Has abstractyes

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