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Record W4400505429 · doi:10.1080/09670262.2024.2353940

<i>Plocamiomonas psychrophila</i> gen. et sp. nov. (Pelagophyceae, Heterokontophyta), an Arctic marine nanoflagellate characterized by microscopy, pigments and molecular phylogeny

2024· article· en· W4400505429 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueEuropean Journal of Phycology · 2024
Typearticle
Languageen
FieldEnvironmental Science
TopicMicrobial Community Ecology and Physiology
Canadian institutionsUniversité Laval
FundersNatural Sciences and Engineering Research Council of CanadaHartmann FondenCarlsbergfondetUniversité Laval
KeywordsBiologyArcticBayPhylogeneticsFlagellumPhylogenetic treeUltrastructureMolecular phylogeneticsBotanyZoologyEcologyPaleontologyOceanographyGeneBacteriaGenetics

Abstract

fetched live from OpenAlex

During a field campaign in Baffin Bay (June, 1998), a sample dominated by small yellow brown biflagellates was collected from a small pocket of liquid water on the sea ice and established into a unialgal culture. Later it was given strain number CCMP2097 and deposited at the NCMA collection. Growth experiments over a range of temperatures and salinities indicated adaptation to variable Arctic conditions. This strain was studied here using light and transmission electron microscopy, HPLC for characterization of photosynthetic pigments and the relationship to related taxa was elucidated from molecular phylogeny. This integrative approach resulted in suggesting Plocamiomonas psychrophila gen. et sp. nov. the first systematically named Arctic species of the Pelagophyceae. Plocamiomonas had two unequally long flagella and the spherical cells measured 7.5 µm in diameter. Novel morphological characters included (1) a swelling on the mature flagellum, (2) a bi-layered theca, thin elongated arm-like structures emanating from the cell surface and (3) a thin filament above the flagellar transition region. This set of morphological characters represented a novel combination for the Pelagophyceae and together with evidence from the phylogenetic position of Plocamiomonas and eight uncultured cold-water pelagophytes supported the proposal of a new order Plocamiomonadales and a new family Plocamiomonadaceae.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.888
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.244
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it