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Developing Magnetic Resonance Reporter Gene Imaging: Essential Magnetosome Proteins Interact in Mammalian Cells

2024· article· en· W4400649273 on OpenAlexaff
Qin Sun, Fateh Ahmad, Cécile Fradin, Terry Thompson, Frank S. Prato, Donna E. Goldhawk

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldPhysics and Astronomy
TopicNuclear Physics and Applications
Canadian institutionsMcMaster UniversityLawson Health Research Institute
Fundersnot available
KeywordsMagnetosomeMagnetotactic bacteriaMagnetic resonance imagingMolecular biophysicsCell biologyNuclear magnetic resonanceBiologyBacteriaPhysicsGeneticsMedicine

Abstract

fetched live from OpenAlex

To detect cellular activities deep within the body using magnetic resonance (MR) platforms, magnetosomes are the ideal model of genetically-encoded nanoparticles. These organelle-like structures produced by magnetotactic bacteria (MTB) store iron biominerals in membrane-bound vesicles and are highly regulated by approximately 30 genes. To translate this technology into a gene-based iron contrast agent in mammalian cells [1], [2], we are introducing essential membrane-associated magnetosome (mam) genes mamI, mamL, mamB, and mamE into the human melanoma cell line MDA-MB-435 using fluorescent fusion protein vectors. While the expression of enhanced green fluorescent protein (EGFP)-MamI alone resulted in a net-like fluorescence pattern, individual expression of red fluorescent Tomato-MamL, Tomato-MamB, or Tomato-MamE all resulted in a mobile, punctate fluorescence pattern. Coexpression of MamL+I resulted in co-localization of both proteins in a mobile, punctate pattern. Here we report the transient expression of three magnetosome proteins (MamL+I+B or MamL+I+E) in mammalian cells, which results in the co-localization and interaction of all three proteins in a mobile, punctate pattern. These results further support interactions between essential magnetosome proteins in the mammalian intracellular compartment and the co-localization required to form a rudimentary magnetosome-like particle.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.642
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.249
Teacher spread0.242 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2024
Admission routes1
Has abstractyes

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